Gene Coch_0341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0341 
Symbol 
ID8366747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp429771 
End bp430451 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content43% 
IMG OID644982762 
ProductABC transporter related 
Protein accessionYP_003140465 
Protein GI256819186 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCAAG CTACCAATAT TCATAAAACT TATAAAGATT TAGAAGTGCT CAAAGGCGTA 
TCGGTGAACG TTTCCAAAGG CGAAATTGTA TCGATAGTAG GAGCTTCAGG AGCAGGAAAA 
ACTACCCTGT TACACATCTT AGGTACTTTG GACAGTCCAG ATGCCAATAA ACCATCGTCG 
TTGGTGATTA ATGGTACGGA TATATTGTCG TTATCCTCCA AAGCCTTAGC AAAATTCCGC 
AATGAACACA TAGGCTTTAT CTTTCAATTT CACCAGTTGT TGCCCGAGTT CACTGCTTTG 
GAGAATATCT GTATTCCTGC ACTCATCAAA GGGGTAGGCA GGAAGGAAGC CGAAAAACGT 
GCAATGGAGC TCTTAGACTT TTTGCACCTC ACCTCGCGTG CTGACCATAA GCCCAATGCC 
CTTTCAGGAG GCGAACAACA ACGAGTATCA GTAGCACGCG CCTTGATGAA CCACCCTTCG 
GTAGTATTCG CTGATGAACC CAGTGGCAAC CTCGATTCCG AAAGTGCTGA AAAACTACAC 
CAACTCTTTT TCCAACTGCG CAATGAGTTC CAGCAGACAT TTGTAATCGT TACCCATAAT 
GAAGAATTGG CTACTATGGC AGATAGAAAG CTGGTGATGG TAGACGGAAG GATAATTATT 
CCCAATTCTT TCCAAAATTA G
 
Protein sequence
MIQATNIHKT YKDLEVLKGV SVNVSKGEIV SIVGASGAGK TTLLHILGTL DSPDANKPSS 
LVINGTDILS LSSKALAKFR NEHIGFIFQF HQLLPEFTAL ENICIPALIK GVGRKEAEKR 
AMELLDFLHL TSRADHKPNA LSGGEQQRVS VARALMNHPS VVFADEPSGN LDSESAEKLH 
QLFFQLRNEF QQTFVIVTHN EELATMADRK LVMVDGRIII PNSFQN