| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0335 |
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| Symbol | |
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| ID | 8366741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 422058 |
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| End bp | 423824 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644982756 |
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| Product | ABC transporter transmembrane region |
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| Protein accession | YP_003140459 |
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| Protein GI | 256819180 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAA AAACATCTCG GACTAAACAT ACTTTTCGTC AGCTGTCGCG CTTTGTAAAA
CCTTATCGTG GGGTATTTAT AGCCGTAGCT CTCTTTGCAG TGCTATCGTC TATCTTTTCG
ACCGCACAAC CTTACTTGAT AAAAGTAGCG ATTGACAATT ATATCACTCC TAAGGATTAC
GAGGGTTTAG TGCGCATTGT GTACATACTC ATAGCTTTGC TATGTGCGGA AGTAACGATG
CAGTTTCTGT TTTCTTATTA CTCTAATTGG CTGGGACAAA CGGTAATACG CGATGTGCGA
GAAAAGCTTT TTGCGCACTT GTTACGCTTT AAGATGCGGT ATTTTGACAA ATCGTCCATA
GGGGTATTGG TAACGCGTGC GGTGAACGAT ATGGAACGGA TAGGCGAAAT TTTCAGTTCG
GGGCTTTTTG AGATGGCAAG CGATATACTG AAAATGTTTG TTATCACGAT TGTAATGTTT
GTGATTGATT GGAAATTGGC GCTTATCAGC TATGCTACGA TGCCTCTGAT TTTGTACTTT
ACGCGTTGGT TTCAACGTTC AATGAAGGCA GCTTTTGTGG AGGTACGTCA CGAAGTGGCA
AACTTAAACG CCTTTGTACA AGAGCGCATT TCGGGTATTA AAGTACTACA ACTTTTTGCG
CAAGAGCGCG AAGAATTGGA GAATTTCAAA AAGATAAACG AGAAACACAA ACAGGCGTGG
CTGAAAACGA TATGGTACAA CTCTATTTTC TTTCCGATTG GCGACTTGTG TGTATCGATT
ACCATTGCGC TGATTGTGTG GTTTGGCGGT CGGCAAATTA TAGGAGAAAA CGTATACGAC
TTAGGGAATA TCTTCCTTTT TATACAGCTT TCGCAACAGT TATTCCGACC TATTAGGCAT
ATAGCCGATA AGTTCAACAC TTTGCAGATG GGCATTATCG CTTCTGACCG CGTATTTGCT
ATTTTGGATA CTGAAACGGA TACTGAAACC GGAGGTGAGA AAGAGTTGAA GGAGGTGAAA
GGTAATATTA AGTTTGAAGA CGTCCGTTTT GAATACGTAG CAGGGGAAGA AATCTTGCAC
GGCATTAGTT TTGAGGTAAA AGAAGGCGAA ACCATTGCGA TTGTAGGGGC AACGGGTGCA
GGGAAGACCA CTATCACCAA TTTGCTAAAC CGTTTTTACG ACTTGACTTC GGGGGCGATT
TACATCGATG GGGTGAACAT TGAGGAGTAT ACTCTCAGTT CGCTACGAGA GCACATTGCT
ACCGTGTTGC AAGACGTATT CCTATTTGCC GATAGTATTT ACAACAATAT CACCTTGAAA
AATCCTGCTA TCACCGAAGA GGAAGTGATT GCGGCTGCTA AGAGCATAGG AGTTCACAAC
TTTTTGATGA GTTTGCCAGA GGGATATCAT TACAACGTGA AAGAGCGTGG GGTTATGCTT
TCGGCAGGAC AACGCCAGCT GATAGCTTTC TTACGCGCCT ATGTACACAA ACCGCAAATT
CTTATTTTGG ACGAGGCAAC GTCTTCAGTA GATTCGCATT CGGAAAAGCT CATACAAGAG
GCTACCGATA AGATGACCGA AGGGCGCACG TCCATCATCA TTGCGCACCG CCTTACCACC
GTGAAAAAAG CTGATAGAAT AATAGTATTA GACAAAGGGA AGATAGTGGA AATAGGCAAT
CACGAGGAGT TGTTGCAAAT AGAAAACGGC TATTACCGCA ACTTGTATGA GGTGCAGTTT
TTGGAAGAAG TGAAATACAA GGAGTGA
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| Protein sequence | MSEKTSRTKH TFRQLSRFVK PYRGVFIAVA LFAVLSSIFS TAQPYLIKVA IDNYITPKDY
EGLVRIVYIL IALLCAEVTM QFLFSYYSNW LGQTVIRDVR EKLFAHLLRF KMRYFDKSSI
GVLVTRAVND MERIGEIFSS GLFEMASDIL KMFVITIVMF VIDWKLALIS YATMPLILYF
TRWFQRSMKA AFVEVRHEVA NLNAFVQERI SGIKVLQLFA QEREELENFK KINEKHKQAW
LKTIWYNSIF FPIGDLCVSI TIALIVWFGG RQIIGENVYD LGNIFLFIQL SQQLFRPIRH
IADKFNTLQM GIIASDRVFA ILDTETDTET GGEKELKEVK GNIKFEDVRF EYVAGEEILH
GISFEVKEGE TIAIVGATGA GKTTITNLLN RFYDLTSGAI YIDGVNIEEY TLSSLREHIA
TVLQDVFLFA DSIYNNITLK NPAITEEEVI AAAKSIGVHN FLMSLPEGYH YNVKERGVML
SAGQRQLIAF LRAYVHKPQI LILDEATSSV DSHSEKLIQE ATDKMTEGRT SIIIAHRLTT
VKKADRIIVL DKGKIVEIGN HEELLQIENG YYRNLYEVQF LEEVKYKE
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