| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0334 |
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| Symbol | |
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| ID | 8366740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 419043 |
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| End bp | 421520 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644982755 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_003140458 |
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| Protein GI | 256819179 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAGA ATGTAGTGAT TGTAGAGTCG CCTGCCAAGG CTAAAACCAT TGAAAAGTTC
TTAGGTAAGG ACTACAAAGT AGTGTCCAGC TATGGGCATA TTGTCGATTT GCCCTCCAAT
GAACTGGGCG TAGATATCCA GCACGGTTTT AAACCTAATT ACCTCATCTC TAACGACAAA
AAAAATCTTG TAAAAGAACT CAAAGCACTC ACGTCCAAAG CCGAAGTAGT ATGGCTCGCT
TCCGATGAAG ACCGTGAAGG AGAAGCTATT GCGTTTCATC TTTCCGAAAC ACTCAAACTA
AAAAAGGAAA ATACCAAGCG CATCGTTTTT AACTCCATTA CCAAATCGGC TATTGAAAAC
GCTATTAAAA ACCCTCGTGG TATCGATTAT AATCTGGTGA ATGCTCAGCA AGCACGCCGT
GTACTCGACC GCCTCGTGGG CTATGAACTC TCTCCCGTAC TGTGGAAAAA AATTAAAAGC
GGACTCTCAG CAGGACGCGT TCAGTCGGTA GCAGTACGCC TTATCGTAGA ACGCGAACGC
GAAATACAAG ACTTCAAAAC GCAATCCTCT TACCGAATTA CTGCCGAATT TATCACCTCA
GAAGGCAAAG TTGTAAAAGC CTCTTTGCCT AAGAATTTCA ACACACAAGC CGAAGCTGAA
AACTTCTTGC AACAGAATAT CGGAGCGCAT TTCAAAGTGC AATCATTAGA AACCAAACCA
GCTAAGAAAA TGCCTGCGCC CCCCTTCACT ACTTCCACCC TCCAACAAGA AGCCGCACGC
AAACTGCACT TTTCAGTAAG CAAAACAATG ACGGTAGCCC AACGCCTCTA CGAATCTGGT
TTCATCACCT ATATGCGTAC CGATAGCGTG AATCTTTCAC AAGAAGCGCT CAACACTGCC
AAAAACGCTA TCGTGCAACT CTTCGGAGCT CAGTACAGTC AAGTGCGCAA GTTCGCTACT
AAAAGCAAAG GCGCACAAGA GGCGCACGAA GCCATTCGTC CTACCGATAT GAGTCGCTCC
TCTATCGCTG CTGAACCCGA CCAGAATAAG CTATACGAAC TGATATGGAA ACGCACCCTT
GCCTCACAAA TGGCAGATGC TCAAATAGAG CGCACTACCG TAAAAATAGA AGCCGATAAG
CACAAAGAAC ACTTCGTAGC CAGTGGCGAA ATGGTACAGT TTGATGGTTT TTTAAAAGTG
TATTTAGAAA GTACTGACGA CGAGGAAGAA GAACAAGAAG GAATGCTCCC CAATCTCAAA
AAAGGAGAAG CTCTTACGCA TCGCTATATT ACTGCTACCG AGCGTTTCAC TCGTCCACTA
CCTCGTTATA CTGAGGCTTC GCTGGTGAAA AAGTTAGAGG AACTCGGTAT CGGACGCCCA
TCTACTTATG CTCCTACCAT TTCTACGATT CAAAACCGCG GATATGTGGA ACGTAGCACA
CTCGAAGGTG AAGTGCGCCC CTATCAGCAA CTTACCCTTA CAGGTAATAG TATCAAAACG
CAAACTCTTA GCGAACGAGT AGGTGCCGAT AAAGGCAAGC TTGTCCCCAC TGATATAGGT
AGTGTAGTAA ACGATTTTCT CGTCTCCCAT TTCGATACGA TAATGGACTA TAATTTCACT
GCCAAAGTAG AAAATAGCTT CGACGAAATA GCCGAAGGCA CTGAGAATTG GACAAAGATG
CTCACACAGT TTTATAATCA TTTTCACTCC GTAGTAGAAA ATGTTGAAAA ACATACAGGT
CGTGAAACAG GTGAACGCGT GCTGGGTACC GACCCTAAAT CAGGTCGCCC TCTCAGCGTA
CGCTTAGGTC GTTATGGAGC TATGGCGCAA ATAGGGAATC CCGACGATGC CGAAAAGCCT
ATTTATGCAA GTTTATTGGC AGGTATGTCT ATCGAAACGA TTACTTTTGA AGAAGCCCTC
AAACTCTTCG AGCTTCCTCG TCAGTTAGGC ATTGTCGATG GTAAGAATGT AGAAGTGAAT
GTAGGGCGTT TCGGCCCCTA TGTGCGCTAC GGCGATGCTT TTATATCACT TGATAAGGGT
GAAGACGTTT TCAGTATAAC TCTCGAGCGG GCTAAGCAAC TCATCGGCGA GAAGAAAAAA
GCTGACGCTC CTATTGCTAC CTATCAAGGA GTGGAAGTTA CCAAAGGTGT AGGTCGTTTT
GGTCCCTTTA TTAAGTGGAA CAATACTTAT ATAAACGTTA CCAAAAAGTA CAATTTCGAC
CATCTTAGTC AGCAAGATGT AGAAGAACTT ATAGAAGATA AGCTCAAAAA AGAATCGGAA
AAGGTAGTAA AAGAATGGGA CGAAGGAGCT ATCCGTATAG AGAAAGCTCG CTGGGGACGT
TTTACCCTCC TCAAAGGTAA AACCAAAGTA GAACTCCCCA AAGACACCGA TATAGCAACT
TTGACCAAAG AACAAGCTCT TACCCTGCTC ACCGAGAAAG AGCCTAAAGC TAAAAAAGCC
CCTTCTAAAA AGAAATAA
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| Protein sequence | MAKNVVIVES PAKAKTIEKF LGKDYKVVSS YGHIVDLPSN ELGVDIQHGF KPNYLISNDK
KNLVKELKAL TSKAEVVWLA SDEDREGEAI AFHLSETLKL KKENTKRIVF NSITKSAIEN
AIKNPRGIDY NLVNAQQARR VLDRLVGYEL SPVLWKKIKS GLSAGRVQSV AVRLIVERER
EIQDFKTQSS YRITAEFITS EGKVVKASLP KNFNTQAEAE NFLQQNIGAH FKVQSLETKP
AKKMPAPPFT TSTLQQEAAR KLHFSVSKTM TVAQRLYESG FITYMRTDSV NLSQEALNTA
KNAIVQLFGA QYSQVRKFAT KSKGAQEAHE AIRPTDMSRS SIAAEPDQNK LYELIWKRTL
ASQMADAQIE RTTVKIEADK HKEHFVASGE MVQFDGFLKV YLESTDDEEE EQEGMLPNLK
KGEALTHRYI TATERFTRPL PRYTEASLVK KLEELGIGRP STYAPTISTI QNRGYVERST
LEGEVRPYQQ LTLTGNSIKT QTLSERVGAD KGKLVPTDIG SVVNDFLVSH FDTIMDYNFT
AKVENSFDEI AEGTENWTKM LTQFYNHFHS VVENVEKHTG RETGERVLGT DPKSGRPLSV
RLGRYGAMAQ IGNPDDAEKP IYASLLAGMS IETITFEEAL KLFELPRQLG IVDGKNVEVN
VGRFGPYVRY GDAFISLDKG EDVFSITLER AKQLIGEKKK ADAPIATYQG VEVTKGVGRF
GPFIKWNNTY INVTKKYNFD HLSQQDVEEL IEDKLKKESE KVVKEWDEGA IRIEKARWGR
FTLLKGKTKV ELPKDTDIAT LTKEQALTLL TEKEPKAKKA PSKKK
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