Gene Coch_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0325 
SymbolribH 
ID8366731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp409648 
End bp410133 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content44% 
IMG OID644982746 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_003140449 
Protein GI256819170 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAG AAAACAAAAA CTTATCACAA TACGATAAAA AAATAATCCC AAATGCGGAA 
TCTCTTCGCT TTGGGATTAT TACTTCTCAG TGGAATGAGC AGATAACTTA CGGAATGCGC 
AATGGTGCCA TCGAAACCCT TAAAGATTGT GGTGCTATTG ATGACAATAT ACTCCTATGG 
GAAGTACCAG GGAGCTTTGA ATTAGTGCAC GCAGCCAAGC GGATGCTCGA TACTAACGAG 
GTAGACGCTA TTATTGTAAT AGGCTGTGTG ATACAAGGAG AGACTCGTCA TTTCGATTTC 
GTGTGCCAGG GTGTTACCCA AGGTATTGCC CAGCTCAATG CGGAACAAAG TGAAGTACCT 
GTTATCTTCT GCGTCCTCAC TGATAATACC TTCCAGCAGT CGCTTGACCG CAGTGGTGGT 
AAGCTCGGTA ATAAAGGCGT GGAGGCGGCT ATTACAGCAA TAAAAATGGC GGTGTTAGGG 
AAGTGA
 
Protein sequence
MATENKNLSQ YDKKIIPNAE SLRFGIITSQ WNEQITYGMR NGAIETLKDC GAIDDNILLW 
EVPGSFELVH AAKRMLDTNE VDAIIVIGCV IQGETRHFDF VCQGVTQGIA QLNAEQSEVP 
VIFCVLTDNT FQQSLDRSGG KLGNKGVEAA ITAIKMAVLG K