| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0307 |
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| Symbol | |
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| ID | 8366713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 386845 |
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| End bp | 389280 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644982728 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_003140431 |
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| Protein GI | 256819152 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACT TGTTTTTAGC AATCTCTGTT TTTCTTGTTA CGTTATCGTA TGGGCAAGAT
GCGAATGTAA AAAAACTCAT CAAACTTGCC GAGAAGGGAG ATGTACAAGC ACAAACTGAA
TTAGCCGATG CTTATTTTAA AGGAAAGGGC GTAAGACGCT CTTATCAGGA AGCCGTAGTA
TGGCTTGAAA AAGTAGCCGA GACAGGCGAT TTGAATGCAC AATACCAGTT GGCACAATGC
TATTTTAACG GTAAAGGCGT ATCAAAATCA CCACAAAAAG GAGTGGAATG GCTCACCAAA
GTAGCCGATG CGGGCAACCC CGAAGCGCAA CGTGAGTTGG CACTATGCTA CCGCGATGGC
AAAGGCGTAG AGCAATCGAA AGAGAAGTAT TACGCACTTA TAGAGAAGCA CGCTGAGAAA
GAGAATCCTG AAGTGCAGTT AGACCTTGCT AAGGCGTACC ACTCAGGAGA AGGGGTTACT
AAAGATGTGA ATAAGGCTAA GTATTGGGCA GAACAAGCCT CAAAGAACGG TAACTCGGAA
GCGGAATTGC TATTAGCTTC TTGGACATAT GAAGTCAATG CATCAAACCC AGAAGCTATA
AAGCGTTTAA CCCAAGTGGC AAATAAAGGC AATACCGAAG CGCAAAGAAT GCTTGCCGAT
GCTTACTTAG AAGGTAAAGG CGTAGAAAAA TCGGAAGCTA AAGCTATTGA AATGCTTGAA
AAAGCAGCCA AAGGAGGCGA TGCTGAAGCA ATGTACCAAT TAGGAAACTT TTACTTCTAT
GGCAACAGTC CGCTTATAGG GAAATACTAC AAGAAAGCAA TTAATTACTA TACCCAAGCC
GCTAACAAAG GCAATGCAGC AGCGCAAGCA CAGTTGGCAC TTTGCTTCTA CAATGGTATA
GGCACCAATG CTTCCCCGAA AGATGCTTTC AGTTGGATAC TCAAATCAGT AAATACCAAT
CCTACTCCTA AAGCACAAAA TAACTTAGGG GTATGTTATG CAGTGGGGAT AGGAGCACAC
CCCTCAAACG CACAAGCCTT AGAGTTCTTC CAAAAAGCTG CTGAAGCAGG TGATGTAACA
GCGCAATACA ACTTAGGAAA TATGCTTTTG CAAGAGGGAC AGTTAGACGT TAAAAAAGGC
TTTGACTACC TCGAGAAAGC AGCTGCGGCT AATCATCTTT TAGCGCTTAA GAAATTAGGT
GATTTATACT TCAACGGGAA ATACACCAAT CAATCGTTTG AACGAGCCTT TGAATATTAT
ACTAAGGCTT CTAAACAAAC ACCTACTCCA CAAAAGGAAA TGTTAGACTA CTTCTACCAA
GGGCAAGAAG AAGCGTATGC CGATGTGTTA TACAATCTTT CACAATGCTA TGCCGAAGGT
AAAGGAGTAA AGAAATCGAT GAGAGAAGCC AGCAAGTGGG CAGTAAAAGC TGCTGGGCTT
TCTAATAAAT ACGCTTTTGA TTGGCTTAAT AAAATAGTTG AAAAGAATGA CCCAAAAGAG
AGTCCGGAAG TGATATTGGC AGTAGCTGAT GGTTATTTCT ATGCTAAAGG GACAAATAAA
CAAAATGATA AAGCCTTTCC ACTCTATGAA AAATTAGCCA AACAACAAGA TAATACCACT
GCACAAAAAC GTTTGATGGA GTATTATTTT GAAGTAAAGA ATCCAGATAA GAACGATGAG
AAAGCAGTTT ATTGGGCAGA GAGAGTGGCT AAGAAAGGAG ATGCTTCTAC TCAATTCAGC
TTAGGAAAAT ACTATATGAC AATGGTACCC GATGTGAAGC CACAACCGGC AACTCCCGCT
CCTAAGCCAA CCCCTAAAAA GCCAGCTGCT ACCGCTACGC CTACTGTTGC TGTTACCTCA
TCACACAATA TAGAGCCTAA TAGTCCTGAA GCCGAAGCAC GTGCTGAGTT ACTTCGCAGA
CAAAGAGGAG GCAAGAATGT TACCCCAGCT AAACAACAAT ATGCTGTGAG AGCAAGTACA
CGACCTGCTG TAGCACAAAA CGCTCCGAAA ACACCTATGA AACACCTCGA TGAAACCAAG
GGGGTACATT GGCTTGCTAA AGCAGCTGAA CAAAACAATG TGGAAGCGCT TAATGAGTTA
GGCTCTTATT ATTTTGAGAA GCAAAACTTT GGTCAGGCAT TGGCTAACTT CCAAAAGTCG
GCACAACGTG ATTACGCTCA AGGACAATAC AACTTAGCTA ACTGTTATTA CAATGGGAAT
GGTATAGACC GTTCGTATGA GAAAGCCGCT AATTACTACA AATTATCTGC ACGTAAGGAT
TATGCTCCTG CGCAATTCCG TTTAGGGCAT TGCTATTATC ACGGTGAAGG CATAGAACAA
TCGGATAGTA GGGCTGCCGA TTGGTTTGAA CAAGCTTGCG ATAACGGTGA GAAGAAAGCT
TGCGATATGC TAAAAGTAGT TACCGCTAAA AAGTAA
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| Protein sequence | MKNLFLAISV FLVTLSYGQD ANVKKLIKLA EKGDVQAQTE LADAYFKGKG VRRSYQEAVV
WLEKVAETGD LNAQYQLAQC YFNGKGVSKS PQKGVEWLTK VADAGNPEAQ RELALCYRDG
KGVEQSKEKY YALIEKHAEK ENPEVQLDLA KAYHSGEGVT KDVNKAKYWA EQASKNGNSE
AELLLASWTY EVNASNPEAI KRLTQVANKG NTEAQRMLAD AYLEGKGVEK SEAKAIEMLE
KAAKGGDAEA MYQLGNFYFY GNSPLIGKYY KKAINYYTQA ANKGNAAAQA QLALCFYNGI
GTNASPKDAF SWILKSVNTN PTPKAQNNLG VCYAVGIGAH PSNAQALEFF QKAAEAGDVT
AQYNLGNMLL QEGQLDVKKG FDYLEKAAAA NHLLALKKLG DLYFNGKYTN QSFERAFEYY
TKASKQTPTP QKEMLDYFYQ GQEEAYADVL YNLSQCYAEG KGVKKSMREA SKWAVKAAGL
SNKYAFDWLN KIVEKNDPKE SPEVILAVAD GYFYAKGTNK QNDKAFPLYE KLAKQQDNTT
AQKRLMEYYF EVKNPDKNDE KAVYWAERVA KKGDASTQFS LGKYYMTMVP DVKPQPATPA
PKPTPKKPAA TATPTVAVTS SHNIEPNSPE AEARAELLRR QRGGKNVTPA KQQYAVRAST
RPAVAQNAPK TPMKHLDETK GVHWLAKAAE QNNVEALNEL GSYYFEKQNF GQALANFQKS
AQRDYAQGQY NLANCYYNGN GIDRSYEKAA NYYKLSARKD YAPAQFRLGH CYYHGEGIEQ
SDSRAADWFE QACDNGEKKA CDMLKVVTAK K
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