Gene Coch_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0306 
Symbol 
ID8366712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp385804 
End bp386670 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content36% 
IMG OID644982727 
ProductUbiA prenyltransferase 
Protein accessionYP_003140430 
Protein GI256819151 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAGAA CTACCTTATT AAAGCTCATC GGAATTTTTT CGGTTGTACG AGGTTATAAT 
ATAATGATAG TATGCCTCGC CCAATATTTA GCTGCTATCT TTGTGCTTTC GCATAAACCT
TGGCGTGAGG TAATTTTTGA CGATTCTTTA CTGATGCTTG TCATTGCAGG AGCCTTGGCT
ATCGCAGGAG GCTATATTAT CAATGGTTTT TACGACAAAG AAAAAGACCT TATCAATAAG
CCCAACAAAA CAATGATAGA CCATCTGGTA AGTCAAAATA CTAAACTCAC TCTTTACTTT
TTGCTTAACT TCCTTTCAGT AATTGTAGCC AGTTATGTAT CCTTCAGAGC AGTGATTTTC
TTCTCAGGAT ATATTTTCAC AATGTGGCTC TATTCTCACC GTATCAAGAA GTTATTATTT
TTTGGCAACC TCACTTCGGC AGTACTGGCT ATTATACCCT TCTTTGCCAT CTTTGTATAT
TACCGCAACT TCGAGGCGAT AATTTTCGTA CACGCCCTAC TCATCTTTCT GCTTATCCTT
ATCAAGGAGT TTATTAAAGA TTTACAAAAT ATCAAAGGAG ATTTGGCTCA TAACTACGCT
ACTATACCCG TAGTATATGG AGAGTCCTTC TCCAAAAAGC TCATTACCCT AAGCGTCGTG
TTGTGTGCCT TACCTATTTA CGTATTGCTC AATTATTTTT CGATAGGAAA TTTAACCTAT
TTTCTATGGT TTATGCTTAT ATATTTATGT ATTTTTGTAT GTCTTCTTTG GCGAAGTAAA
GACCAAAAAC ATTATGCATT GCTCCACAAT ATGCTTAAAT TGATATTAGT AGCAGGCATA
TTCAGCGTAG CACTTACTGT AAAATAA
 
Protein sequence
MRRTTLLKLI GIFSVVRGYN IMIVCLAQYL AAIFVLSHKP WREVIFDDSL LMLVIAGALA 
IAGGYIINGF YDKEKDLINK PNKTMIDHLV SQNTKLTLYF LLNFLSVIVA SYVSFRAVIF
FSGYIFTMWL YSHRIKKLLF FGNLTSAVLA IIPFFAIFVY YRNFEAIIFV HALLIFLLIL
IKEFIKDLQN IKGDLAHNYA TIPVVYGESF SKKLITLSVV LCALPIYVLL NYFSIGNLTY
FLWFMLIYLC IFVCLLWRSK DQKHYALLHN MLKLILVAGI FSVALTVK