Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0306 |
Symbol | |
ID | 8366712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 385804 |
End bp | 386670 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644982727 |
Product | UbiA prenyltransferase |
Protein accession | YP_003140430 |
Protein GI | 256819151 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAGAA CTACCTTATT AAAGCTCATC GGAATTTTTT CGGTTGTACG AGGTTATAAT ATAATGATAG TATGCCTCGC CCAATATTTA GCTGCTATCT TTGTGCTTTC GCATAAACCT TGGCGTGAGG TAATTTTTGA CGATTCTTTA CTGATGCTTG TCATTGCAGG AGCCTTGGCT ATCGCAGGAG GCTATATTAT CAATGGTTTT TACGACAAAG AAAAAGACCT TATCAATAAG CCCAACAAAA CAATGATAGA CCATCTGGTA AGTCAAAATA CTAAACTCAC TCTTTACTTT TTGCTTAACT TCCTTTCAGT AATTGTAGCC AGTTATGTAT CCTTCAGAGC AGTGATTTTC TTCTCAGGAT ATATTTTCAC AATGTGGCTC TATTCTCACC GTATCAAGAA GTTATTATTT TTTGGCAACC TCACTTCGGC AGTACTGGCT ATTATACCCT TCTTTGCCAT CTTTGTATAT TACCGCAACT TCGAGGCGAT AATTTTCGTA CACGCCCTAC TCATCTTTCT GCTTATCCTT ATCAAGGAGT TTATTAAAGA TTTACAAAAT ATCAAAGGAG ATTTGGCTCA TAACTACGCT ACTATACCCG TAGTATATGG AGAGTCCTTC TCCAAAAAGC TCATTACCCT AAGCGTCGTG TTGTGTGCCT TACCTATTTA CGTATTGCTC AATTATTTTT CGATAGGAAA TTTAACCTAT TTTCTATGGT TTATGCTTAT ATATTTATGT ATTTTTGTAT GTCTTCTTTG GCGAAGTAAA GACCAAAAAC ATTATGCATT GCTCCACAAT ATGCTTAAAT TGATATTAGT AGCAGGCATA TTCAGCGTAG CACTTACTGT AAAATAA
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Protein sequence | MRRTTLLKLI GIFSVVRGYN IMIVCLAQYL AAIFVLSHKP WREVIFDDSL LMLVIAGALA IAGGYIINGF YDKEKDLINK PNKTMIDHLV SQNTKLTLYF LLNFLSVIVA SYVSFRAVIF FSGYIFTMWL YSHRIKKLLF FGNLTSAVLA IIPFFAIFVY YRNFEAIIFV HALLIFLLIL IKEFIKDLQN IKGDLAHNYA TIPVVYGESF SKKLITLSVV LCALPIYVLL NYFSIGNLTY FLWFMLIYLC IFVCLLWRSK DQKHYALLHN MLKLILVAGI FSVALTVK
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