Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0286 |
Symbol | |
ID | 8366692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 365614 |
End bp | 366822 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644982707 |
Product | ROK family protein |
Protein accession | YP_003140410 |
Protein GI | 256819131 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.162895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACTAA AATTTTTAGA AGAAATTAAA CAAGGCATCA GAAGCGCCTC ATTGAAAAAG GATATTATCT GTTATTACAT CAATAACGGA GATGATACAC TTGCCGACCT TGGCAAGGAA CTGAACTTCA GTGTTCCTAC CGTTACTAAA ATGGTGGGCG AACTGATAGA AGATGGTATA GTGATGGACT TTGGGAAGAT GGAAACCCCA GGAGGTAGAC GTCCTAATAT CTATGGATTG AACCAAAGTT CGGGATATTT TATAGGTGTA GATATCTCTC AAAAACGCGT TCATATAGGG CTTATCAATT TTAAGGGAGA TTTGATAGAT GAACAGATGG ATATCTCTTT TGAGGAAGCG CATCCTCACG AGCGTTTTGA ACGTTTATGT GAAATAATTG AAGATTTTAT GAGCCATACA GTGGTGCCTA AGGACAAAAT ACTGAGTATT GGCATTAATA TTTCAGGGCG TGTGAACCCT CAAACGGGGC ATAGTTATAG TTTCTTTTAT TTCGATGAAC GTCCGCTTAC TGAAATGTTT GAAGAAAAAT TGGGTATAGA TGTCTCTATT GATAACGATT CGCGTGCGAT GGCTTATGGT GAATATATTA AAGGACGCGT ACAGGCTGAA AAAAATATCA TCTACGTGAA TGTAGGTTGG GGATTAGGCT TAGGAGTCAT CGTTAATGGG CAGCTATATT ATGGGAAATC GGGCTTTTCA GGTGAGTTTG GGCATATTAC TGCCTTTGAA AACGAGATAT TATGCCACTG TGGTAAGAAA GGTTGCTTAG AAACAGAGGC TTCGGGCTCT GCTCTTTATC GTAAATTCTT GGAAAAACTT CATAACGGTC AATCGTCTTT ACTTACTCAA CAGAAGGAAA ATGAAGACGA AATTACACTC AACGATATCA TAGATGTAGC TTTGCAGGAA GATATATTGG CTATAGAACT TATTGAAGAG GTGGGGAATA CGTTGGGTAA ACACGTGGCG GGCCTCATTA ACCTATTTAA TCCTGAATTG GTGATTATTG GTGGTACTCT TGCCAATGCA GGCGACTATT TGATATTGCC TTTGCGCAGT GCTATCAAGA AGTATTCTTT GAATTTAGTG AATAAAGACT CTTCGATAAA AGTATCAAAA TTAGGAGATA AGGCGGGTCT ATTAGGTGCA AGTCTCCTCG CCCGTAGTAA ATTTATAGGA TTGATATGA
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Protein sequence | MGLKFLEEIK QGIRSASLKK DIICYYINNG DDTLADLGKE LNFSVPTVTK MVGELIEDGI VMDFGKMETP GGRRPNIYGL NQSSGYFIGV DISQKRVHIG LINFKGDLID EQMDISFEEA HPHERFERLC EIIEDFMSHT VVPKDKILSI GINISGRVNP QTGHSYSFFY FDERPLTEMF EEKLGIDVSI DNDSRAMAYG EYIKGRVQAE KNIIYVNVGW GLGLGVIVNG QLYYGKSGFS GEFGHITAFE NEILCHCGKK GCLETEASGS ALYRKFLEKL HNGQSSLLTQ QKENEDEITL NDIIDVALQE DILAIELIEE VGNTLGKHVA GLINLFNPEL VIIGGTLANA GDYLILPLRS AIKKYSLNLV NKDSSIKVSK LGDKAGLLGA SLLARSKFIG LI
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