Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0278 |
Symbol | |
ID | 8366684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 358617 |
End bp | 359438 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644982699 |
Product | secreted protein |
Protein accession | YP_003140402 |
Protein GI | 256819123 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000164081 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAGGG TGTTCGAGGG CACTCCTCGA ACACCCATTT TTTTACCCTT AAAAGAAGTA AGTATGATGA AGAAGATATT ATGGTTTTGT ATGTTTTTAT GTGTGACGAC ACTTGTAGCT CAGGAAACAG TGTTGCACGG ACATATTTAC AGTGTGCAAA ACAATAAACC AATGCCTAAT GTACACATCT TGAACCTCAA TAAAGTAAGA GGTACCACTA CCAATGACAA AGGTGATTTT AGTATCAGAG TAAGTGCTAA CGACACGCTA TACATTTCTT TTTTAGGGTA TAAATCTACC AAGATACGCA TAACAAACGA TATGATAAAA TATCAAGGGT TGAAAATAGG AATGACAGAG CTTGCTTATA CTTTACAAGA AGTGGTTGTA ACTCCTTATA AACTCACAGG TTATTTGGAT ATTGACGCTA AAAATGCACC TATCAATGAC AATACGCGTT ATAGCATTTC GGGGTTAGAT ATAGGTTATG AAAGTAGAGC TAGTGCAAGT GCTGTGGGTA GAGTGCTAAG CGCTGTAATG AACCCTGCCG ACTTGCTGAG TCGCTCGTTT GGTGCCAAAG GGAAAGAAAT GCGCAAACTG AGAGAGATGC GCAAAGACAA CGAATTGAGC GATGCTCTTT CCACCCGTTA CGACCGCGAA ACCCTATTAG AACTTTTGCA AGTAGACCGT AGTGAATTAG AAGATATCAT TCGCTCTTGC AACTATTCTA ACGATTTTAT AATGACGGCA AACGACCTGC AAGTGCTTGA AGCCATCAGT CAGTGTTACG AAGAATATAG GGTTTTGCAC AAGAAAAAAT AA
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Protein sequence | MIRVFEGTPR TPIFLPLKEV SMMKKILWFC MFLCVTTLVA QETVLHGHIY SVQNNKPMPN VHILNLNKVR GTTTNDKGDF SIRVSANDTL YISFLGYKST KIRITNDMIK YQGLKIGMTE LAYTLQEVVV TPYKLTGYLD IDAKNAPIND NTRYSISGLD IGYESRASAS AVGRVLSAVM NPADLLSRSF GAKGKEMRKL REMRKDNELS DALSTRYDRE TLLELLQVDR SELEDIIRSC NYSNDFIMTA NDLQVLEAIS QCYEEYRVLH KKK
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