Gene Coch_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0278 
Symbol 
ID8366684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp358617 
End bp359438 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content39% 
IMG OID644982699 
Productsecreted protein 
Protein accessionYP_003140402 
Protein GI256819123 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000164081 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGGG TGTTCGAGGG CACTCCTCGA ACACCCATTT TTTTACCCTT AAAAGAAGTA 
AGTATGATGA AGAAGATATT ATGGTTTTGT ATGTTTTTAT GTGTGACGAC ACTTGTAGCT
CAGGAAACAG TGTTGCACGG ACATATTTAC AGTGTGCAAA ACAATAAACC AATGCCTAAT
GTACACATCT TGAACCTCAA TAAAGTAAGA GGTACCACTA CCAATGACAA AGGTGATTTT
AGTATCAGAG TAAGTGCTAA CGACACGCTA TACATTTCTT TTTTAGGGTA TAAATCTACC
AAGATACGCA TAACAAACGA TATGATAAAA TATCAAGGGT TGAAAATAGG AATGACAGAG
CTTGCTTATA CTTTACAAGA AGTGGTTGTA ACTCCTTATA AACTCACAGG TTATTTGGAT
ATTGACGCTA AAAATGCACC TATCAATGAC AATACGCGTT ATAGCATTTC GGGGTTAGAT
ATAGGTTATG AAAGTAGAGC TAGTGCAAGT GCTGTGGGTA GAGTGCTAAG CGCTGTAATG
AACCCTGCCG ACTTGCTGAG TCGCTCGTTT GGTGCCAAAG GGAAAGAAAT GCGCAAACTG
AGAGAGATGC GCAAAGACAA CGAATTGAGC GATGCTCTTT CCACCCGTTA CGACCGCGAA
ACCCTATTAG AACTTTTGCA AGTAGACCGT AGTGAATTAG AAGATATCAT TCGCTCTTGC
AACTATTCTA ACGATTTTAT AATGACGGCA AACGACCTGC AAGTGCTTGA AGCCATCAGT
CAGTGTTACG AAGAATATAG GGTTTTGCAC AAGAAAAAAT AA
 
Protein sequence
MIRVFEGTPR TPIFLPLKEV SMMKKILWFC MFLCVTTLVA QETVLHGHIY SVQNNKPMPN 
VHILNLNKVR GTTTNDKGDF SIRVSANDTL YISFLGYKST KIRITNDMIK YQGLKIGMTE
LAYTLQEVVV TPYKLTGYLD IDAKNAPIND NTRYSISGLD IGYESRASAS AVGRVLSAVM
NPADLLSRSF GAKGKEMRKL REMRKDNELS DALSTRYDRE TLLELLQVDR SELEDIIRSC
NYSNDFIMTA NDLQVLEAIS QCYEEYRVLH KKK