| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0272 |
|---|
| Symbol | |
|---|
| ID | 8366678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 352303 |
|---|
| End bp | 353559 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644982693 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003140396 |
|---|
| Protein GI | 256819117 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA TTCTATTTTT AGTAGCTTTA TTGATGGCAA TTCCTGCCTC AGCTCAGTTG
CTTCGTCATA ATTTCGATGA AGAAGGCGAC ACTTTTATTC AAGGTATTGT GCGTGGACAG
TTTTGGGCTC GCCTTACCGA AACAAACCCT GGTACTACCG TACAAGGTGA ACCTGCCGAT
AAGGTATTCG ACCTTTCTGT ACGGCGTTAT CGCTTAGGCT TCTTCGCCCA AGTAGAAAAG
AAATGGTTGT TCTATATCCT AATGGGAAAT AACAATCTCA ACCAAAGTAC CCTCCAAAGC
TCCGATTTCC GTCTGCTTGA CGTGCTCGGT CAGTATACTT TTAGCGAAAA ATTGAGCATT
GGGGTAGCCA AGACCACCTT TGCAGGAGCT GGGCGCTTTT CCAACGCTTT CTCTAACGGC
TCTATGCTCA CTCTCGACCC TTCCGTTTAT TATCTTAACA CCCTTAATCA TTTCGATGAT
ATGGGGCGTA GAATAGGTGT TTACGCCAAA GGTCAGTTAG GAAAGATTGA TTATTTCGTG
TCTTTGCAAA ATTCACCTGC CCCCTCTGAG AGTGCGCGTA CAGCTTTTAA TTATAGCAAA
GGGCAACCCA AAGTGCTTAC TTCCTCTTAC CTAAAATATG AGTTTTGGGA CGATGAGAGC
AACAAATTGC CTACTAGCGG AGGTAATGGC ACTTATTTAG GAACTAAACA CATAATGAAT
CTCGGTATTG GCTATGAATA TCAAGCTAAA ATAAGAGAAA TCACTGATGG AACTAATACT
TCCTATCGCG ATTACTTCAA TTTAGGAATC GACTTCTTTA TAGATACTCC TATTTCTGAA
CGCAACGACG CTATTACCGC TTATTTAGGC TTTAACAGCA CTCATTTTGG TAGTGATTAT
GTGAGAAGTG TGGGTGCTAA TAGCATTTTT GCAGGAGGAA CCTCTCTTAA TGGGGCTGGT
AATGCTACTC CCGCCATAGG TACAGGTAGT ACCTTATTCT TGCAATTAGG CTATCTGCTT
CCTAAATGGG AAGATTGTAA TATCCGTATA CAACCCAATG CAGGCTGGCG ATTTGCTAAC
TATAAAGCCC TCAACAGTAA CGTGAATATC TATTCAGTAG GCGTGAATAC TTATTTTAAC
GGACAAAAGA GCAAACTCTC CTTAGGCTAT GAGAACCGCC CTATCTTCGA TGCTACTGAT
AAAAAGGTAA GTACTCGTTT AGGTACTTTT GTATTGCAAT ACCAAATAGA GCTTTAA
|
|---|
| Protein sequence | MKRILFLVAL LMAIPASAQL LRHNFDEEGD TFIQGIVRGQ FWARLTETNP GTTVQGEPAD
KVFDLSVRRY RLGFFAQVEK KWLFYILMGN NNLNQSTLQS SDFRLLDVLG QYTFSEKLSI
GVAKTTFAGA GRFSNAFSNG SMLTLDPSVY YLNTLNHFDD MGRRIGVYAK GQLGKIDYFV
SLQNSPAPSE SARTAFNYSK GQPKVLTSSY LKYEFWDDES NKLPTSGGNG TYLGTKHIMN
LGIGYEYQAK IREITDGTNT SYRDYFNLGI DFFIDTPISE RNDAITAYLG FNSTHFGSDY
VRSVGANSIF AGGTSLNGAG NATPAIGTGS TLFLQLGYLL PKWEDCNIRI QPNAGWRFAN
YKALNSNVNI YSVGVNTYFN GQKSKLSLGY ENRPIFDATD KKVSTRLGTF VLQYQIEL
|
|---|
| |