Gene Coch_0265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0265 
Symbol 
ID8366671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp342544 
End bp343305 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content41% 
IMG OID644982686 
Producthydrolase, TatD family 
Protein accessionYP_003140389 
Protein GI256819110 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0321314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGATA CACATACACA CTTATATTCA GAAGAATTTG ACGCTGACCG TACCGAGATG 
ATCGCACGAG CCAAAGCAGC TGGCGTAACC CGTTGTTTTA TCCCAGCTAT TGATGCGAGC
TATACCCAGC GAATGTTTCA GCTGAAAAAC GATTATCCTG ACTACGTTTT CCTAATGAAC
GGTCTGCACC CTTGTAGCGT GAAAGAAAAC TATCAGGAGG AACTTGCGCA CGTTGAGAAT
TTGATGCAAT CGCATTTCTT TTGCGCTATT GGCGAAATAG GCATCGACCT TTATTGGGAT
AAAACTTTTC TCAAAGAGCA ACAAGAGGCT TTCCAGAGGC AAATACAGTT GGCTAAAAAG
CATCAGTTGC CTATTGTTAT TCACTGTCGA GAGGCTTTCG ACGAAGTGTT TGAGGTTTTA
GAAACTGAAA AAAGTGACGA CCTTTTTGGC ATTTTTCACT GCTTTACGGG TACAGAAGCG
CAAGCTCAGC GCGCTATTGG CTACGGCTTA CATTTAGGTA TTGGCGGAGT GGTAACTTTT
AAGAACGGAA AGATAGACCA GTTTTTAAAA AATATAGATT TACAGCATAT TGTTTTAGAA
ACCGATTCAC CTTATTTGGC ACCAGTACCT TACCGCGGGA AACGCAACGA AAGTGCTTAT
ATAGTGAAAG TTGTAGAGAA ATTATCAGAT ATATATGCTT TGCCCGAAAG CGAGATTATA
CGCCTTACTG ACGAAAATGC TACAAATATA TTTAAGATTT AA
 
Protein sequence
MIDTHTHLYS EEFDADRTEM IARAKAAGVT RCFIPAIDAS YTQRMFQLKN DYPDYVFLMN 
GLHPCSVKEN YQEELAHVEN LMQSHFFCAI GEIGIDLYWD KTFLKEQQEA FQRQIQLAKK
HQLPIVIHCR EAFDEVFEVL ETEKSDDLFG IFHCFTGTEA QAQRAIGYGL HLGIGGVVTF
KNGKIDQFLK NIDLQHIVLE TDSPYLAPVP YRGKRNESAY IVKVVEKLSD IYALPESEII
RLTDENATNI FKI