Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0265 |
Symbol | |
ID | 8366671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 342544 |
End bp | 343305 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644982686 |
Product | hydrolase, TatD family |
Protein accession | YP_003140389 |
Protein GI | 256819110 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0321314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGATA CACATACACA CTTATATTCA GAAGAATTTG ACGCTGACCG TACCGAGATG ATCGCACGAG CCAAAGCAGC TGGCGTAACC CGTTGTTTTA TCCCAGCTAT TGATGCGAGC TATACCCAGC GAATGTTTCA GCTGAAAAAC GATTATCCTG ACTACGTTTT CCTAATGAAC GGTCTGCACC CTTGTAGCGT GAAAGAAAAC TATCAGGAGG AACTTGCGCA CGTTGAGAAT TTGATGCAAT CGCATTTCTT TTGCGCTATT GGCGAAATAG GCATCGACCT TTATTGGGAT AAAACTTTTC TCAAAGAGCA ACAAGAGGCT TTCCAGAGGC AAATACAGTT GGCTAAAAAG CATCAGTTGC CTATTGTTAT TCACTGTCGA GAGGCTTTCG ACGAAGTGTT TGAGGTTTTA GAAACTGAAA AAAGTGACGA CCTTTTTGGC ATTTTTCACT GCTTTACGGG TACAGAAGCG CAAGCTCAGC GCGCTATTGG CTACGGCTTA CATTTAGGTA TTGGCGGAGT GGTAACTTTT AAGAACGGAA AGATAGACCA GTTTTTAAAA AATATAGATT TACAGCATAT TGTTTTAGAA ACCGATTCAC CTTATTTGGC ACCAGTACCT TACCGCGGGA AACGCAACGA AAGTGCTTAT ATAGTGAAAG TTGTAGAGAA ATTATCAGAT ATATATGCTT TGCCCGAAAG CGAGATTATA CGCCTTACTG ACGAAAATGC TACAAATATA TTTAAGATTT AA
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Protein sequence | MIDTHTHLYS EEFDADRTEM IARAKAAGVT RCFIPAIDAS YTQRMFQLKN DYPDYVFLMN GLHPCSVKEN YQEELAHVEN LMQSHFFCAI GEIGIDLYWD KTFLKEQQEA FQRQIQLAKK HQLPIVIHCR EAFDEVFEVL ETEKSDDLFG IFHCFTGTEA QAQRAIGYGL HLGIGGVVTF KNGKIDQFLK NIDLQHIVLE TDSPYLAPVP YRGKRNESAY IVKVVEKLSD IYALPESEII RLTDENATNI FKI
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