Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0262 |
Symbol | |
ID | 8366667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 339360 |
End bp | 340091 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644982682 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_003140386 |
Protein GI | 256819107 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0861801 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TGTCATCTAA GCTACTTCTA GTAGCAATGT TAATTTTAAA CGTGGCTATG GTTAGCGCTC AGGAAGCAAC TGAAACGATG CAACAAAGCA AAGGCTTCCA CCAAGTATTT AAAGAGCGTT TTATTGAAGG GGGTCCTATG TATATGGCTC CTATCTTGCT CTGCTTGATT ATTGGTTTGG CAGTAGCTAT TGAGAGAATT ATTTACCTCA ATATGGCGAC TACCAATTCT AAAAAGCTAA TTGCCGATAT TGAAGAGGCA TTGGATAGCA AAGGTATTGA GGCAGCTAAA GAAGTGTGCC GTAATACAAA AGGTCCTGTT GCATCTATTT TCTATCAAGG TCTTGACCGT TCATCAGAAG GTATTGATAT GGTTGAAAAA TCAGTAGTAT CTTACGGAGG TGTACAGATG GGACAATTAG AAAAGAACGT ATCTTGGATT TCGCTCTTTA TTGCTATTGC ACCGATGTTA GGGTTTATGG GTACGGTAAT TGGTATGATT GAAGCGTTCG ATAAGATTAG TTCAGCTGGT GGTTTGGACG CATCATTGAT TGCTGGTGAT ATCAAGGTTG CCTTGCTTAC TACAGTGTTT GGTTTGATTG TAGCGATGAT ACTACAAGTA TTCTACAACT ACATCATTGC TAAAATCGAC GCTATCGTAA ATGATATGGA AGATGCTTCT ATCTCATTGA TAGACCTTTT AGTAGCAAGA AAAATGAAAT AA
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Protein sequence | MKKMSSKLLL VAMLILNVAM VSAQEATETM QQSKGFHQVF KERFIEGGPM YMAPILLCLI IGLAVAIERI IYLNMATTNS KKLIADIEEA LDSKGIEAAK EVCRNTKGPV ASIFYQGLDR SSEGIDMVEK SVVSYGGVQM GQLEKNVSWI SLFIAIAPML GFMGTVIGMI EAFDKISSAG GLDASLIAGD IKVALLTTVF GLIVAMILQV FYNYIIAKID AIVNDMEDAS ISLIDLLVAR KMK
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