Gene Coch_0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0262 
Symbol 
ID8366667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp339360 
End bp340091 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content38% 
IMG OID644982682 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_003140386 
Protein GI256819107 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0861801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TGTCATCTAA GCTACTTCTA GTAGCAATGT TAATTTTAAA CGTGGCTATG 
GTTAGCGCTC AGGAAGCAAC TGAAACGATG CAACAAAGCA AAGGCTTCCA CCAAGTATTT
AAAGAGCGTT TTATTGAAGG GGGTCCTATG TATATGGCTC CTATCTTGCT CTGCTTGATT
ATTGGTTTGG CAGTAGCTAT TGAGAGAATT ATTTACCTCA ATATGGCGAC TACCAATTCT
AAAAAGCTAA TTGCCGATAT TGAAGAGGCA TTGGATAGCA AAGGTATTGA GGCAGCTAAA
GAAGTGTGCC GTAATACAAA AGGTCCTGTT GCATCTATTT TCTATCAAGG TCTTGACCGT
TCATCAGAAG GTATTGATAT GGTTGAAAAA TCAGTAGTAT CTTACGGAGG TGTACAGATG
GGACAATTAG AAAAGAACGT ATCTTGGATT TCGCTCTTTA TTGCTATTGC ACCGATGTTA
GGGTTTATGG GTACGGTAAT TGGTATGATT GAAGCGTTCG ATAAGATTAG TTCAGCTGGT
GGTTTGGACG CATCATTGAT TGCTGGTGAT ATCAAGGTTG CCTTGCTTAC TACAGTGTTT
GGTTTGATTG TAGCGATGAT ACTACAAGTA TTCTACAACT ACATCATTGC TAAAATCGAC
GCTATCGTAA ATGATATGGA AGATGCTTCT ATCTCATTGA TAGACCTTTT AGTAGCAAGA
AAAATGAAAT AA
 
Protein sequence
MKKMSSKLLL VAMLILNVAM VSAQEATETM QQSKGFHQVF KERFIEGGPM YMAPILLCLI 
IGLAVAIERI IYLNMATTNS KKLIADIEEA LDSKGIEAAK EVCRNTKGPV ASIFYQGLDR
SSEGIDMVEK SVVSYGGVQM GQLEKNVSWI SLFIAIAPML GFMGTVIGMI EAFDKISSAG
GLDASLIAGD IKVALLTTVF GLIVAMILQV FYNYIIAKID AIVNDMEDAS ISLIDLLVAR
KMK