| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0235 |
|---|
| Symbol | |
|---|
| ID | 8366640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 308206 |
|---|
| End bp | 308610 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 644982655 |
|---|
| Product | hydroxyisourate hydrolase |
|---|
| Protein accession | YP_003140359 |
|---|
| Protein GI | 256819080 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2351] Transthyretin-like protein |
|---|
| TIGRFAM ID | [TIGR02962] hydroxyisourate hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.700482 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAATC CAATTCTAAT ATTGCTAATA CTTTTTAACA CATTTATCCA AGCACAAGAG
AAATATCAAT TATCAAGTCA TATTTTAGAT ATTTCACAAG GCAAACCTGC TCCAAATGTA
AAGATAGCTC TATCTAAGCA AGATAAAAAT CAAAACTGGG TATTGATAGA TGAGAAATAC
ACAGATAACA ATGGGAGAAT TAAAGATTTT TTGAAAGAAG AATCTAATAA AAATAATAAT
GGGGTTTATA AACTCACTTT TTATATTACT CCTTATTTTG AAAAGTTGAA ACAAAAAACA
TTTTATCCCT TTATAGAAGT AGTTTTTGAG ATAAAAGATA ATCAACATTA TCACATCCCG
ATTACATTAT CTCCATATGG TTATTCTACT TACAGAGGAA ACTAA
|
|---|
| Protein sequence | MRNPILILLI LFNTFIQAQE KYQLSSHILD ISQGKPAPNV KIALSKQDKN QNWVLIDEKY
TDNNGRIKDF LKEESNKNNN GVYKLTFYIT PYFEKLKQKT FYPFIEVVFE IKDNQHYHIP
ITLSPYGYST YRGN
|
|---|
| |