| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0230 |
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| Symbol | |
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| ID | 8366635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 305014 |
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| End bp | 305565 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644982650 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003140354 |
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| Protein GI | 256819075 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.491527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGAGG CACTTGCTGA AAATATAGTC GCTGCAAAAG CAGGTAAACA ACGAGCTTTT
AGCTGGTTGC TAGACGAGTT TTGGACTGAT GTGTACAACT TTCAGCTCAA GCGTGTAAAT
AATGAGGTAG AGGCAGAGGA TATTAGCATA CAAACATTTG CTAAGGCTTT CGACAAGCTC
CATACTTACG ATGAACAATA CTCATTCCGC ACTTGGCTCT TCACTATTTC CAAAAATATT
CACATAGATA ACCTGAGAAA GCAAAATGAG TCGCTATTGC ACTTAGACCG AGAGGAAAAA
CAATCTAAAA CGCTCATAGA TGAGACTCCT ATCATAGAGG ATAGCCTCAT TATGGAACAG
CAGTTTGATT ATTTGCTAAA GAGTATAAAA CAAATGAAAG AGCCTTACCG AACGGCAATA
CAACTGCGCT ATCTGCACGA AAAAAGCTAT AAAGAGATTG CCGAAGAAAT GCAATCAACG
ATGAGCAGTG TGAAGATTAC CCTGCTAAGA GCTAAGAAGA TACTAGCAGA GATATTAAAG
AAAAACAGAT GA
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| Protein sequence | MAEALAENIV AAKAGKQRAF SWLLDEFWTD VYNFQLKRVN NEVEAEDISI QTFAKAFDKL
HTYDEQYSFR TWLFTISKNI HIDNLRKQNE SLLHLDREEK QSKTLIDETP IIEDSLIMEQ
QFDYLLKSIK QMKEPYRTAI QLRYLHEKSY KEIAEEMQST MSSVKITLLR AKKILAEILK
KNR
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