| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0227 |
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| Symbol | |
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| ID | 8366632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 298370 |
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| End bp | 301513 |
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| Gene Length | 3144 bp |
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| Protein Length | 1047 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644982647 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003140351 |
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| Protein GI | 256819072 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.809994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGTA GAAAGATAAA CAAGCGCATT TTACTATCGC TTTTGCTCTG CAACTGTTCG
GGTGCTCTTT TCGCCCAACA AGTAAAAGGA GTGGTGAAAG CAAAATCCGA CAACAGCCCT
ATGATGGGTG TAAGTGTGGT GGTAAAGCAC AAAACAGTAG GTGCTTCTAC TGATTTCGAC
GGGAATTATA CCCTTCAACC CGTTGTAGCC ACCGATAGTT TGGTCTTTTC TTATATAGGC
TACAAATCCC AAACCGTAGC CGTGAAAGGA CGCAAGGAAA TAAACGTAAG TTTAGAAGAA
GAGGTGACTA CTCTCGAAGG AGTTACCGTT TCTGTAGGGT ATCGTACTGA ACGTAAAACC
GACCTTACCG GTGCAGTATC AGTAGTAAAG GTAAACGAGA TGATGTCTAC TGCCGAAAAC
AACCCTATGA AAGCCCTCCA AGGTCGTGTA GCAGGTATGC AAGTAACCGA TAATGGGGGT
CCTGCTGGTA AAGCTACCAT TCGCATTCGC GGTATCGGTA CACTTAATAA CAACGACCCT
CTTTATATCA TCGATGGAGT ACCTACTCAG GGCGGTATGC ACGAGCTGAA CTCTAACGAT
ATCGAGAGTA TACAAGTGTT GCGTGACGCT TCGGCAGCAA GTATCTACGG GTCACGTGCT
GCCAATGGGG TCATCGTTAT TACTACCAAA AAAGGTAGAA ACGGAGTGTT AAAGGTAGAT
TTCGACCATT ATACTACCGT TTCGATGTTT CACTCTCGTA TGAAGATGCT CAATGCTAAT
GAGTATGCAC AAGTGCTTTG GAAAGCAGCC GTAAACCGTG GTAACGACCC TAACCAAAAC
GCTTTAGGTA TTCACTACGA TTATACTACC GATGCCAATG GTCACAGCAC CCTTAATAAT
TTGTATTATC CACGTCAGTA TTTCGATAAG TCAGGAAGCC CTATGCTCCC TTCTAATACC
GATTGGTTCA AGGAAATCAC TCGTATGGGG GTAACTGAAT CTTATAACCT TTCGGTTACC
AATGGTACTG AAAAAGGTAA CTACTTCCTT TCGTTAGGCT ATTACAACAA CGATGGTTTG
GTAAAGAATA CCGATTTCTC TCGCCTCTCT GCGCGTATCA ATACCGATTA CAAACTCTTT
GGCGATGTAG TAACCATAGG TGAAAACTTC ACTGTAAACC GTACCAGCGA GGTAGAGCAA
CCTTACCAAA TTACCGAAGC AGCAATGATA GCTGTACCTT TCATTCCGGT ACGCACTCAA
GACGGTAAAC ATTGGGGAGG TCCTGTAAAT GGGTTGCCCG ACCGTCAGAA CCCTGCTCGC
TTAGTAAACG ACAATAAGAA TAATCGTTAT AACTACTGGC GTATGTTCGG GAATGCTTTT
GTAAACATTA AACCTATTGA TAAGCTCAAT ATCCGTTCTA ACTTTGGGGT AGATTACGGT
AATTTCTATA AACGTACACT CAATCATTCG TATATTTCCG GTTTTATGGA AGAAGGCAAA
GAAAAAACCT TCTCTCAACT CGAACAATCT CACTGGACGA AATGGAACTG GGCAAATACA
GCTACCTACG ACTTCGAGCT TGGTAAGAGT CGATTTGAAA CCTTAGCAGG TATGGAAATG
TTCTCACAAG ATGATATAAA CTTCTCTGTA AAAGGTACTA CTCTTGCCTT AGAAACTCCT
GAATATATGT GGCCTAATCT CGCTACAGGA GGTATTACAG GAGGTGGTGG AGCTACCGGT
TATAAGTTGC TTTCTTTCTT CGGAAAAATC AACTATGCTT TTGATAACAA ATACCTCGCT
TCAGCTACTC TTCGTCACGA TGGTTCTTCT CGCTTTGCCA AAGAGAACCG CTGGGGTACT
TTCCCTGCTT TCAACTTGGG TTGGCGTCTT TCTCAAGAAG CCTTTATGGA GAATATTCGC
AATACCGTTT CTGAAATCAA ATTGCGCTTC GGTTGGGGGC AAAACGGTAA CCAAGAAATC
GGTAACTACT CTATTTACGA TATTTACGAT CCTTACTATG GGGTAACAGG CGACTATATT
TGGTCTGGAA CAGGTATTTG GAATACCTCT TACGATATCG AAGGAAAAGG CTCTGGTCAG
TTAGCTTCTG GTTTCCGTCG CAGTCGTCTC GGTAACAAAG ATCTCAAATG GGAAACTACC
ACACAAACCA ACTTCGGGTT AGACTTCGGT TTCTTTAATA ACAATCTCTA CGGTTCGGTA
GAATACTATA TCAAAAAGAC CAAAGACATC TTGGTAGAAC CTCCTTATGC AGGTATCAAG
GGTGAAGGTG CTACCCAATG GGTAAATGGT GCTGGTATGG AAAACAAAGG TTGGGAAGTA
TCAGTAGGTT ATCGTAACGA GACCAAAGGC GGACTCAAAT ACGATATCAA TGCCAACGTT
TCAACCAATA AAAATAAAGT TACTGAATTA CCAGAATCTG TAGTCAATGC TTACGGCGGA
AATGGTAAAT GGGATAATAT CTTAGGTCGT CCTTATCAAT CTTATTACGG TTATGTAGCT
GATGGTATCT TCAAAACCCA AGAAGAACTC GATCAGCACC CTATACAAAA CGGTAAAGGT
ATTGGTCGTA TCCGCTACCG CGATTTGAAT AACGATGGAG TAGTAAACGA AGACGACCGC
ACTTGGATAG GGACTCCTTA CCCTGATTTT ATCTACGGTC TCAATCTCAA CTTAGAGTAC
AAAAACTTCG ATTTTACCCT CTTCTTGCAA GGCGTACAGA ATGTCGATAT TATCAACGAT
GTGAAAAAAC ATACTGACTT TTGGAGTGTG GTGGATACCT ACTCCAATAA AGGACGCCGT
TTGCTCGATG CTTTCGACCC CGTTACCAAT CCTAGTTCCG ATATTCCAAG TGTAGCTTAT
ACCGATGATA ATAACGAAGG GCGTATGTCT ACTTACTATG TAGAGAATGG CTCTTACCTA
AAACTTCGTA ACGTACAGTT AGGCTATACT TTACCTAAAG AAGTATCCGA AAGAATTAAG
CTCAGCAAGT TGCGCTTGTA TGTAAGCGGT CAGAATCTCT TTACTATCAA GAGCAAATCG
TTTACAGGTA AAGACCCTGA AAACCCTAAT TATGGTTATC CTATCCCAAT AACATTCACT
ATGGGATTGA ATGCTAGCTT TTAA
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| Protein sequence | MMSRKINKRI LLSLLLCNCS GALFAQQVKG VVKAKSDNSP MMGVSVVVKH KTVGASTDFD
GNYTLQPVVA TDSLVFSYIG YKSQTVAVKG RKEINVSLEE EVTTLEGVTV SVGYRTERKT
DLTGAVSVVK VNEMMSTAEN NPMKALQGRV AGMQVTDNGG PAGKATIRIR GIGTLNNNDP
LYIIDGVPTQ GGMHELNSND IESIQVLRDA SAASIYGSRA ANGVIVITTK KGRNGVLKVD
FDHYTTVSMF HSRMKMLNAN EYAQVLWKAA VNRGNDPNQN ALGIHYDYTT DANGHSTLNN
LYYPRQYFDK SGSPMLPSNT DWFKEITRMG VTESYNLSVT NGTEKGNYFL SLGYYNNDGL
VKNTDFSRLS ARINTDYKLF GDVVTIGENF TVNRTSEVEQ PYQITEAAMI AVPFIPVRTQ
DGKHWGGPVN GLPDRQNPAR LVNDNKNNRY NYWRMFGNAF VNIKPIDKLN IRSNFGVDYG
NFYKRTLNHS YISGFMEEGK EKTFSQLEQS HWTKWNWANT ATYDFELGKS RFETLAGMEM
FSQDDINFSV KGTTLALETP EYMWPNLATG GITGGGGATG YKLLSFFGKI NYAFDNKYLA
SATLRHDGSS RFAKENRWGT FPAFNLGWRL SQEAFMENIR NTVSEIKLRF GWGQNGNQEI
GNYSIYDIYD PYYGVTGDYI WSGTGIWNTS YDIEGKGSGQ LASGFRRSRL GNKDLKWETT
TQTNFGLDFG FFNNNLYGSV EYYIKKTKDI LVEPPYAGIK GEGATQWVNG AGMENKGWEV
SVGYRNETKG GLKYDINANV STNKNKVTEL PESVVNAYGG NGKWDNILGR PYQSYYGYVA
DGIFKTQEEL DQHPIQNGKG IGRIRYRDLN NDGVVNEDDR TWIGTPYPDF IYGLNLNLEY
KNFDFTLFLQ GVQNVDIIND VKKHTDFWSV VDTYSNKGRR LLDAFDPVTN PSSDIPSVAY
TDDNNEGRMS TYYVENGSYL KLRNVQLGYT LPKEVSERIK LSKLRLYVSG QNLFTIKSKS
FTGKDPENPN YGYPIPITFT MGLNASF
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