Gene Coch_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0221 
Symbol 
ID8366626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp288847 
End bp289725 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content43% 
IMG OID644982641 
ProductPfkB domain protein 
Protein accessionYP_003140345 
Protein GI256819066 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.349538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA CAGTAGTAGG ATTGGGAGAA ATCCTTTGGG ATGTCTTCCC TGAAAGAAAA 
GTATTAGGCG GTGCGCCCGC TAATTTCGCT TACCACGTGT CGCAATTTGG CTTCAACGGC
TATGCTGTGA GTGCCATTGG AGGCGATCTA CTCGGTAAGG AAATACTAAA AAGTTTAGAA
GAAAAAGAAC TCAACTACAT CATTGAGAAG ACTGATTTCC CCACAGGTAC TGTAAAAGTA
CAGTTAGACG GTCGCGGGGT GCCTACCTAT GAGATTAGCG AAAATGTAGC GTGGGACAAT
ATTCCATTCT CTTCGCGAAT TGAGAACTTA GCAAAGAACA CTAATACTGT GTGCTTCGGG
TCGTTAGCAC AACGCAGTGA AATATCGCGT GCCACTATCC ACAAGTTCTT AGATTTAATG
CCTGCCGAGA GTTTAAAAGT ATTCGATATC AACCTCCGCT TGAAATATTT CAGCAAAGAG
GTAATTGCCG ATTCGTTAGA CAAGGCAACT GCATTAAAAA TCAACGATGA GGAGATAGTG
AAAGTGGCTG AAATGTTCAA TTTGCAAGGA ACTGATGAAG AGGTATGTAA GCACCTATTG
GAGAAATACA ATCTCAAATT CCTTATCTTA ACACAAGGTA CAAGAGGTAG TTATGTGTTT
ACGCCTAATG AGAAATCGTT CTTAGGTACG CCTAAGGTTA CCATCGCCGA TACAGTAGGA
GCTGGAGACT CGTTCACAGC TGCTTTTGTA GCCTCTTACC TCAATGGTCG CAGTATTGCC
CAATCGCATC AATTAGCGGT AGAAGTATCG GCTTACGTGT GTCAGCAACA CGGTGCGATG
CCTCGCCTCG CCGATGCTCA TTTGGAGTTG TTTAGATAA
 
Protein sequence
MKNTVVGLGE ILWDVFPERK VLGGAPANFA YHVSQFGFNG YAVSAIGGDL LGKEILKSLE 
EKELNYIIEK TDFPTGTVKV QLDGRGVPTY EISENVAWDN IPFSSRIENL AKNTNTVCFG
SLAQRSEISR ATIHKFLDLM PAESLKVFDI NLRLKYFSKE VIADSLDKAT ALKINDEEIV
KVAEMFNLQG TDEEVCKHLL EKYNLKFLIL TQGTRGSYVF TPNEKSFLGT PKVTIADTVG
AGDSFTAAFV ASYLNGRSIA QSHQLAVEVS AYVCQQHGAM PRLADAHLEL FR