| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0220 |
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| Symbol | |
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| ID | 8366625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 286068 |
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| End bp | 288872 |
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| Gene Length | 2805 bp |
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| Protein Length | 934 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644982640 |
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| Product | two component transcriptional regulator, AraC family |
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| Protein accession | YP_003140344 |
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| Protein GI | 256819065 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.497584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCATTT GGAGTTGTTT AGATAAAATG ACTTTTAGGA AGTATCATAT ACTTTTTTTA
TATTTCGCTC TCTTTGCTTG CCTTGCTTGC CAAAGGGAGC GAAACCCCCG TTATGTGATA
GGGGTGTCGC AGTGCAGTGA AGACCTTTGG CGACAAACGA TGAACGAGGA GCTAAAACGC
GAAGTAGCCC TTTACCAAGC CAATACTGAG CTACTGATTC GCAGTGTGAA AGACGATACT
CCTAAGCAAA TTGCCGATAT AGAGTGGTTC ATAGAACAAA AGGTAGATGT GCTCGTGGTT
TCGCCTAACG AGTCGGAAGC GTGTACACCA GTTATTGAAA AGGCTTACCA GCAGGGTATT
CCCGTGATTT TGGTAGATAG GAAAATAGCT ACTGAGAGTT ATACTGCCTA TGTGGGAGCT
AATAATTACC AAATAGGTAA AGAAGCGGGA CACTATGCGA TAGGTATTCT CAAAGGCAAA
GGCAATATAG CCGAAGTGCG TGGTACCAAA GGCTCAACCT CCGATGCGGA ACGCCATAAA
GGCTTTGTAG ATGCCCTTAA TAATGCTCCT GAGGTGCGAA TAGTAGCCGA GACCTGGGGC
AACTTCCTCA AAGCAGATGC CAAAGTGCAA ATGCAACAAC TTTTTCAACA ACACCCCAAT
ATCGACCTTG TGTTTGCGAT GAACGACCCA ATGGCAGCGG GTACTCACGA AGCAGCGATG
CAATTCAACG GTAAAATACC CTTTATCATA GGGGTAGATG CGCTACAACA AGAAGGAATT
AGCAATATAG AGAACAACGT GCAAGACGCA TCGTTTATCT ATCCTACGGG AGGAGAAAAG
GTTATTGACC TTGCAATGAA AATACTCCAT AAACAACCTT TTGAGCGCGA GAATATCCTC
AATACCGCTG TGGTGGACAA GAGCAATGTG CGTATTTTAC AGTTGCAAAC AGAGCAAATT
GCTCAAAAAC AAGCTAAGAT AGAGGATATC AATCAGCAGC TGAGTGAGAG CCTTATTCAG
CATACTACTC AGCGTACACT CTTCTACATT TCTATTATTG CTATTGGTTT GATTACTATA
TTTTTGGCAA TAGCTATCAG AGCATATCGC ACCAAGAGTC GTGCAAATAA TCTGTTAGAA
AAACAAAATG AAGAAATCAA ACGTCAGGCT ACCGAATTGC AACAACAGAA AGAACGCTTA
GAGGAAATCT CGGCGCAATT AGAAGAGGCG ACCCAAGCCA AATTACTTTT CTTTACCAAT
ATTTCTCACG AGTTCAAAAC ACCGTTGTCG CTTATTTTAG GACCTGTGCA GACGCTTTTG
GCTCACAATT CACTCCCCAA AGAAGAACAA GACTTGTTAT TCCTCATCAA AAAGAACAGC
AACCGACTTT TGCATCTCAT TTCCGAAGTA ATTGAGTTCC GCAGTTATGA GAATGGCAAG
ATGCAAATGT ACTTCACTAA GGGCAATCTA AAACGGTTTC TTACTGAACT CAATTCTTTT
TTTAGTGACC GTATCAAACA AAAGAAACTC AACTTTCAGT TTCTTGCCGA AGATACTTCT
TTTGAAATGG CTTTCGATAA GGAAAAAGTA GAGAAAATCT ACTTCAACCT GCTTTCTAAT
GCACTGAAAT TTACACCTCA AGGAGGAAGT ATCACCGTGT CGTTAGAAAA AGAAGACCTT
CCCCTAACCC CCTCCAAAGG AGGAGTAGCT GTGCTACGTG TGTTCAATAG CGGTTCATAT
ATCCCAAAAG ACAAACAAAG TGAGGTGTTT GAGCACTTCT ACAAAATAAA TCCCGATAGC
GAAGGTTCGG GTATAGGTTT GGCTTTGGTA CAAGCCTTAG TAGCCTCACA CAACGGTACT
ATCAGCGTAG AGAGTACAGA AGGGGAGGGG ACAACCTTCC TCATTCGCCT GCCTTTTACT
CAAGAACAAG TATCGGTAAA AGCGGTATAC GACAGCAATT ACATAGAAAC CCATCTCGAC
TTATTGCCTT CGTTGCCCGC ACCTACCGAG AAACTCAAAC TACCTACGGT TTCTCCAACG
GCTTCGGAGA AACCTACTGT ACTGATTGTG GAAGATAACG AGGATATGCG TCAGTTTATT
CGATATATCC TCAGTGATGA CTATAACCTT ATCGAAGCTG AAAACGGTGA AGAAGGCTTT
GAAGTCGCTA AAAAGCACCT TCCCGATGTA GTAATCAGCG ATGTGATGAT GCCCAAGACT
GATGGCTTCG ATTTATGTCA GTTGATAAAA ACTAACGTGG CTACTAATCA TATTCCTGTG
ATTTTGCTCA CCGCTTATGC GTTAGACGAA CAGAAGCAAG TGGGCTTCGA GAGTGGTGCC
GATGCCTATA TTGCGAAACC TTTCAACATA AAATTACTGA AAACACGAGT GCGCAAGCTC
ATTGAGAACC GCAAGAAGAT ACGTGAGAGT TTTAGTAATT TCCTCTTGAA CGAAACTAAA
CAAGAGACTT TAGGTAAGGT AGAACAGCAG TTTATCACCG ATTTTACGCA TTACGTAGAG
AACTCTATCG CCAATCCTGA AATGAATATA GACGAAATAG CCGATGCCTT AGGTTTGTCG
CGCTCTAACC TATATCGCAA AATCAAATCC CTCACCGACT ATTCGCCTAA TGAGCTTATT
CGTACCATAC GAGTAAAATA CGCTAAGCAG TTGCTCAACA GCAAAGCCAA GAGCATCTCG
GAAGTCGCTT ATGAAGTAGG ATTTTCTTCT CCTTCCTACT TTGCGAAATG CTTTAAAGAT
TTTTACAACG AGAGTCCGAC AGAGTACTTG GAACGGATTA GGTAG
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| Protein sequence | MLIWSCLDKM TFRKYHILFL YFALFACLAC QRERNPRYVI GVSQCSEDLW RQTMNEELKR
EVALYQANTE LLIRSVKDDT PKQIADIEWF IEQKVDVLVV SPNESEACTP VIEKAYQQGI
PVILVDRKIA TESYTAYVGA NNYQIGKEAG HYAIGILKGK GNIAEVRGTK GSTSDAERHK
GFVDALNNAP EVRIVAETWG NFLKADAKVQ MQQLFQQHPN IDLVFAMNDP MAAGTHEAAM
QFNGKIPFII GVDALQQEGI SNIENNVQDA SFIYPTGGEK VIDLAMKILH KQPFERENIL
NTAVVDKSNV RILQLQTEQI AQKQAKIEDI NQQLSESLIQ HTTQRTLFYI SIIAIGLITI
FLAIAIRAYR TKSRANNLLE KQNEEIKRQA TELQQQKERL EEISAQLEEA TQAKLLFFTN
ISHEFKTPLS LILGPVQTLL AHNSLPKEEQ DLLFLIKKNS NRLLHLISEV IEFRSYENGK
MQMYFTKGNL KRFLTELNSF FSDRIKQKKL NFQFLAEDTS FEMAFDKEKV EKIYFNLLSN
ALKFTPQGGS ITVSLEKEDL PLTPSKGGVA VLRVFNSGSY IPKDKQSEVF EHFYKINPDS
EGSGIGLALV QALVASHNGT ISVESTEGEG TTFLIRLPFT QEQVSVKAVY DSNYIETHLD
LLPSLPAPTE KLKLPTVSPT ASEKPTVLIV EDNEDMRQFI RYILSDDYNL IEAENGEEGF
EVAKKHLPDV VISDVMMPKT DGFDLCQLIK TNVATNHIPV ILLTAYALDE QKQVGFESGA
DAYIAKPFNI KLLKTRVRKL IENRKKIRES FSNFLLNETK QETLGKVEQQ FITDFTHYVE
NSIANPEMNI DEIADALGLS RSNLYRKIKS LTDYSPNELI RTIRVKYAKQ LLNSKAKSIS
EVAYEVGFSS PSYFAKCFKD FYNESPTEYL ERIR
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