Gene Coch_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0218 
Symbol 
ID8366623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp283631 
End bp284293 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content39% 
IMG OID644982638 
Productprotein of unknown function DUF421 
Protein accessionYP_003140342 
Protein GI256819063 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0485499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATACAA TTCCTTATAT TGAATCCGAG GAGTTTTTCT ATTTGGATGT ATTCCTAAAA 
TTGCTTTTAG GATTGTTGGC TCTTGCCTTA ATCATCAACA AATCGGGCAA GGGTAATTTA 
GCACCGAGTT CGGCAATGGA TCAGGTGCAA AATTACGTAC TTGGGGGTAT TATTGGAGGT 
GTGATTTACA GTCCATCGGT GAGTATCTTT CAGTTTGCTA TCGTATTGGC TATTTGGGCA 
TTCCTTATCA TAGGGTTACG TCAGTTAAAA ACTAAAAACC AAGCTTTTAG GAGGTTTATA 
GACGGCGCTC CTGTGATTGT TATCAATCGA GGTAAGATAG ATATAGCCGC CTGCAAAAAA 
GCTAAAATTA CAGCACACGA ACTCGCTTTC AAACTGCGTA AAGAAGGGGT ATACTATATC 
AGAGAGGTGA AAAGAGCGGT ACTTGAACAG AATGGCGAAC TCATTATCGT GTTGGCAGGA 
GAAGAAAACC CCAAATATCC TGTCATTACC GATGGGATTA TTCAAAAAAG CGTGCTGGAA 
GATGTAGATA AAAGCGAAGA ATGGCTACTT GGAGAGCTAC AAAAGACAGG ATACAGCAAT 
CCTTCTGAGA TATTTTTAGC AGAATACGAA AATGCTCAGA TAAAAGTTAT ACCCTATATT 
TAG
 
Protein sequence
MYTIPYIESE EFFYLDVFLK LLLGLLALAL IINKSGKGNL APSSAMDQVQ NYVLGGIIGG 
VIYSPSVSIF QFAIVLAIWA FLIIGLRQLK TKNQAFRRFI DGAPVIVINR GKIDIAACKK 
AKITAHELAF KLRKEGVYYI REVKRAVLEQ NGELIIVLAG EENPKYPVIT DGIIQKSVLE 
DVDKSEEWLL GELQKTGYSN PSEIFLAEYE NAQIKVIPYI