Gene Coch_0214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0214 
Symbolera 
ID8366619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp278590 
End bp279471 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content43% 
IMG OID644982634 
ProductGTP-binding protein Era 
Protein accessionYP_003140338 
Protein GI256819059 
COG category[R] General function prediction only 
COG ID[COG1159] GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00436] GTP-binding protein Era 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.890226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACAAAG CTGGATTTGT AAATATCATC GGGAACCCCA ACGTAGGAAA ATCTACCCTT 
ATGAACGCCT TTGTAGGCGA AAAACTTTCT ATTATCACCT CCAAGGCACA GACCACGCGG
CACCGTATTT TTGGTATCGT AAGTGGTGAT GATTTTCAGG TGGTTTTTTC GGACACCCCT
GGTATTATCA AGCCATCGTA TGCCTTACAA GCCTCGATGA TGGACTTTGT AAAGAGTGCT
TTTGAAGACG CCGACATTCT CATTTATATG GTAGAAATAG GCGAAAAAGA GCTGAAAGAC
GAGGCTTTCT TTAATCGCAT CAACCAGTTG GACGTGCCTG TATTGTTGCT CATCAACAAA
GTGGATACTT CCGACCAAAA TGTATTAGAG GAACAAGTAG CTTACTGGAA GGAAAAAGTG
CCTCGTGCCG AAATATATCC TATTTCGGCT TTGCGCAACT TTCAAACCGA AGTGGTGTTC
AACCGCATTA TAGAACTCTT GCCCGAGTCA CCTGCGTTTT TCCCAAAAGA CCAACTCACC
GATAAACCGG AGCGTTTCTT TGTAAACGAG ATTATACGCG AGAAGATACT ATTGCACTAC
AAGAAGGAAA TTCCCTATTC GGTAGAAGTA GAGACCGAAA GTTTTGCCGA TAGCGAGACT
ATCATTCACA TTCGCTCGGT GATAATGGTA GAACGCGAAA GCCAAAAGGG GATTATCATA
GGTCATAAAG GGGAAGCCTT AAAGCGGGTA GGCATTGAGA CACGGACTGA TTTAGAGAAG
TTTTTCGGCA AACAAATACA CTTAGAACTT TTCGTAAAAG TAAACAAAGA TTGGCGTAGC
AATGTGCGAC AATTGCGCAG GTTTGGTTAC GATATCAAAT AA
 
Protein sequence
MHKAGFVNII GNPNVGKSTL MNAFVGEKLS IITSKAQTTR HRIFGIVSGD DFQVVFSDTP 
GIIKPSYALQ ASMMDFVKSA FEDADILIYM VEIGEKELKD EAFFNRINQL DVPVLLLINK
VDTSDQNVLE EQVAYWKEKV PRAEIYPISA LRNFQTEVVF NRIIELLPES PAFFPKDQLT
DKPERFFVNE IIREKILLHY KKEIPYSVEV ETESFADSET IIHIRSVIMV ERESQKGIII
GHKGEALKRV GIETRTDLEK FFGKQIHLEL FVKVNKDWRS NVRQLRRFGY DIK