Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0202 |
Symbol | |
ID | 8366607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 252906 |
End bp | 253667 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644982622 |
Product | acyl-ACP thioesterase |
Protein accession | YP_003140326 |
Protein GI | 256819047 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3884] Acyl-ACP thioesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGATA AAACAATTTT CACCGAAACT TATAAAGTGC GCAGCACACA AGTAAACCTT AACAATCAAC TCGGGTTATA TGGCGTATTA GGTATGTTGC AAGATATCGC TGCCGAACAC GCTTCACTTT TAGGGTTCGG TTATGAAGAG TTAGTAAAAA AAGGATTCTT TTGGGCACTC ATACAGCAAA AACTAAAAAT GCACTATTGG CCTCAATGGA ATGAACGTAT CACCGTCAAA ACGTGGTCTC TCCCTGTAAA AGGAGTGTAT GCTTTTCGCG AATTCGAACT TTTTTGCAAC GACCAAAAAA TAGGTGAATG TGCTAGTACT TGGATTACCT TAGATATTCA GACACGTCGC CCCATTGAGC TTACTGACCG CCAAGAAATC TTCTCTCCTC GTACCGAAGG CGGACTCTCT TTCCATACCG ACCGTATCAA TCTCCCCGAA GGTATGTATC AAGTAAACGA TTTTAAAGTG CGTGTAAGCG ATTTAGATGT CAATTCACAC GTAAATAATG TAAAATACAC TCAGTGGGCA CTCGATATGA TGACAGAGCG CAACCATCGC GAGTTTGTTA TTAAAGAATA TGATATCAAT TTCTTATCCG AAACTTTTAT GGGAGACGAA ATGCAAGGAT TTAAAAGCAA AGGTAAATAC ATCGACGATG CTCATAACTT GGTAGAAACT TATCTGTACG CACAAAAAAT AGGTGCTCCT AAACCTGCGT TCATATCTCG CTGGATTGCT GAACGAATTT AA
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Protein sequence | MEDKTIFTET YKVRSTQVNL NNQLGLYGVL GMLQDIAAEH ASLLGFGYEE LVKKGFFWAL IQQKLKMHYW PQWNERITVK TWSLPVKGVY AFREFELFCN DQKIGECAST WITLDIQTRR PIELTDRQEI FSPRTEGGLS FHTDRINLPE GMYQVNDFKV RVSDLDVNSH VNNVKYTQWA LDMMTERNHR EFVIKEYDIN FLSETFMGDE MQGFKSKGKY IDDAHNLVET YLYAQKIGAP KPAFISRWIA ERI
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