Gene Coch_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0202 
Symbol 
ID8366607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp252906 
End bp253667 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content40% 
IMG OID644982622 
Productacyl-ACP thioesterase 
Protein accessionYP_003140326 
Protein GI256819047 
COG category[I] Lipid transport and metabolism 
COG ID[COG3884] Acyl-ACP thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGATA AAACAATTTT CACCGAAACT TATAAAGTGC GCAGCACACA AGTAAACCTT 
AACAATCAAC TCGGGTTATA TGGCGTATTA GGTATGTTGC AAGATATCGC TGCCGAACAC
GCTTCACTTT TAGGGTTCGG TTATGAAGAG TTAGTAAAAA AAGGATTCTT TTGGGCACTC
ATACAGCAAA AACTAAAAAT GCACTATTGG CCTCAATGGA ATGAACGTAT CACCGTCAAA
ACGTGGTCTC TCCCTGTAAA AGGAGTGTAT GCTTTTCGCG AATTCGAACT TTTTTGCAAC
GACCAAAAAA TAGGTGAATG TGCTAGTACT TGGATTACCT TAGATATTCA GACACGTCGC
CCCATTGAGC TTACTGACCG CCAAGAAATC TTCTCTCCTC GTACCGAAGG CGGACTCTCT
TTCCATACCG ACCGTATCAA TCTCCCCGAA GGTATGTATC AAGTAAACGA TTTTAAAGTG
CGTGTAAGCG ATTTAGATGT CAATTCACAC GTAAATAATG TAAAATACAC TCAGTGGGCA
CTCGATATGA TGACAGAGCG CAACCATCGC GAGTTTGTTA TTAAAGAATA TGATATCAAT
TTCTTATCCG AAACTTTTAT GGGAGACGAA ATGCAAGGAT TTAAAAGCAA AGGTAAATAC
ATCGACGATG CTCATAACTT GGTAGAAACT TATCTGTACG CACAAAAAAT AGGTGCTCCT
AAACCTGCGT TCATATCTCG CTGGATTGCT GAACGAATTT AA
 
Protein sequence
MEDKTIFTET YKVRSTQVNL NNQLGLYGVL GMLQDIAAEH ASLLGFGYEE LVKKGFFWAL 
IQQKLKMHYW PQWNERITVK TWSLPVKGVY AFREFELFCN DQKIGECAST WITLDIQTRR
PIELTDRQEI FSPRTEGGLS FHTDRINLPE GMYQVNDFKV RVSDLDVNSH VNNVKYTQWA
LDMMTERNHR EFVIKEYDIN FLSETFMGDE MQGFKSKGKY IDDAHNLVET YLYAQKIGAP
KPAFISRWIA ERI