| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0199 |
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| Symbol | |
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| ID | 8366604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 246846 |
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| End bp | 248381 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644982619 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003140323 |
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| Protein GI | 256819044 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.820829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TACTGACACT TTTCGTTACA GTGTTGTTAT TAACGGCTTG TAATAAAGAT
TTCTTAGATC TTAATCCAAA CGACAGACCT TCTTCTGGTA CGTTTTGGAA AACTGAAAGT
GACTATAAAA TGGCACTCAC CGCTTGTTAT GGTGCTATGC AACACCCTCA CTTTGCGCAA
GGTCTTCCTA CGTGGGATAA CCTTACCGAT AATGCTTATG GGCAACATAA TGAAGGCCAA
TATGGTATGA CCATTGGGCT ATCGCAAGGT AATGTTTATG CCAATTCCGA AGGTTTTGTT
AGCAATGTAT ACACTTATGG TCTCAAAGCT GTAATGCGTG CAAATATCTT CTTGAGAAAC
TTAGAAGTTT TCTCTGGTAT CGATGCCAAT ACTAAAAAGA GAAATGAAGC CGAAGCTCGT
ATGATACGCG CTTTCTTCTA TTCTTATCTC TACCGCTGTT ATGGCGATGT ACCTGTTATA
AACGAGGTAT TAGATTTAAA TACCCAGTTC AAAGCCAAAA GTCCTGCTAC CGAAGTGTAT
AACTTCATAA TGCAAGACCT CGATTTTGCT ATTGCCAACT TGCCTTCTCA ACCTTATAGC
GTTGAAAAAG GACGTTGGAC GAGCAACGCT GCTAAAGCCT TCAAAGCGCG ATTGATTTTG
TATACCGCCT ATGACGACAG TGGTAATGCC ATTGCCGCCA AAATGCAAGA AGCAAAAACA
GTGTTAGCCT CTATTTCAGG TTATTCATTA GCAACTGATT TCTCCGATAA CTTTTTCGAT
TTAAAACAAG AAAGTTGTCC TGAGATAATG ATGTCAGTCA AATATCTTGC TCCCAACAAC
TATACAAATG CTGATTTATG GTATGGCGAT TGGATAGTAG TTTCTCCATT AGCTAACTTT
ATAAACGAGT TCGAAAATGC CAATGGCACC ACCGCTACTG CCGTAGCACA AACTAATGGT
AAGATAGATA TCAATACTTT CACCAATGCC TCTATGGCAA GTCGTGACCC ACGTATGGCA
AAGACGATCT TCGTAGATAA GTTCTTGCAC CGTGGCGTTT ACGTAACACC CAGCAATGCA
CGTGCTACCA ATATAGGATT AGCAAAATTC TTGTCTCCTA ACTTAGATGC CCCTTATCAA
TACTCTACCC AAAGCCAACA AGACTGGGTA CTAATGCGTT ACGCCGATGT ACTCCTAATG
AAAGCAGAAG TAGAAAACGA ACTTTCAGGA GCCTCTGCCG AAGTGTATAA CTATATAAAC
CAAGTACGCA CAAGAGCAGG AATGCCTAAT CTACCAGCAG GTCTTTCTAA AGAGAATATG
AGAACCCGCA TTCGCCACGA ACGTCGGGTG GAATTGGCTT TTGAAGGCGA GCGCTATTTC
GATCTTAAAC GTTGGAAAAT TGCCCCTCAA GTGCTCAACA ATGTTACTGA CGGTATCGTA
GCACGTAAGT TTGAATCCAA ACACTATCTA TGGCCTCTAC CTCAATCAGA AATTGATAAA
AACAGAGGTA TTTTAGTTCA AAATCCTAAT TATTAA
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| Protein sequence | MKKILTLFVT VLLLTACNKD FLDLNPNDRP SSGTFWKTES DYKMALTACY GAMQHPHFAQ
GLPTWDNLTD NAYGQHNEGQ YGMTIGLSQG NVYANSEGFV SNVYTYGLKA VMRANIFLRN
LEVFSGIDAN TKKRNEAEAR MIRAFFYSYL YRCYGDVPVI NEVLDLNTQF KAKSPATEVY
NFIMQDLDFA IANLPSQPYS VEKGRWTSNA AKAFKARLIL YTAYDDSGNA IAAKMQEAKT
VLASISGYSL ATDFSDNFFD LKQESCPEIM MSVKYLAPNN YTNADLWYGD WIVVSPLANF
INEFENANGT TATAVAQTNG KIDINTFTNA SMASRDPRMA KTIFVDKFLH RGVYVTPSNA
RATNIGLAKF LSPNLDAPYQ YSTQSQQDWV LMRYADVLLM KAEVENELSG ASAEVYNYIN
QVRTRAGMPN LPAGLSKENM RTRIRHERRV ELAFEGERYF DLKRWKIAPQ VLNNVTDGIV
ARKFESKHYL WPLPQSEIDK NRGILVQNPN Y
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