| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0198 |
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| Symbol | |
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| ID | 8366603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 243771 |
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| End bp | 246833 |
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| Gene Length | 3063 bp |
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| Protein Length | 1020 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644982618 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003140322 |
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| Protein GI | 256819043 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAA AAATCTTCTT ATTACTCATA GCTCTATGGA GTACTACCTC TCTGCTATGG
GCACAAAACA AACAAATTTC CGGTACTGTT ACCGATGAGA AAGGCACTCC TCTTCCCGGA
GTGAGTGTGC AAATCAAATC AACTACCCGT GGGGTAGCTA CTGATTTTGA TGGTAAATAT
AGCATTGAAG CCTCTCAAGG CAACGTGCTA TTGTTCAGTT ATATGGGCTA TGCCTCCCAA
GAAAAAACCG TTGGTAAGGG GGGGGGTAAT AGCTTGATTA TCAATGTAAA ACTAAAAGAA
GACACCCAAG AATTGAGTGA AGTAGTAGTA GTGGGCTATG GTTCTCAAAA GAAAGAAAAC
CTTACGGGAG CCGTAGCAGC AGTTTCGGCT GAAACACTTA CGAAACGTCC AGTAGCTAAT
ACCGCTACAA TGCTACAAGG GCAAGTACCT GGGTTACGCA TTGTGCAAGG TTCAGGGCAA
CCTGGTGCCG AGTCGGCTTC AATACGTGTG CGTGGACAAG GTACTTATAG CTCCGCTGGC
TCCGACCCCT TGGTACTTAT CGATGGAGTT CCTGGTTCTT TGGCAAACAT CAATCCTAAT
GACATCGAAA ACATTTCAGT GCTCAAAGAT GCAGCTTCAG CTTCTATCTA CGGGGCAAGA
GCTGCTAATG GGGTAATTTT AGTCACTACC AAATTAGGTA ACGACGGACA TTTCAAAATC
TCTTATCAAA ACAACTTTGC TATTCATACC CCTACACGTA TGCTCAAATT GGTTACCAAT
TCAGCTGAAT ATATGCGCTT GTTCAACGAA GCTAAAACCA ATTCGGGTAT TACTGATGGG
CATTACACTC CCGAAATGAT AGCTGCCTAT GAGAATGCTA CCGATCGTAT TCAATATCCA
AACTTCGATT GGATAGACTA TATGTTCAAC CCTGCTTTTG TGCAAAACCA CAATCTTACG
CTCAGTGGGG GTGCTAAAGG AACTCTCTAC AATATTGCTT TAGGTTATGT AGACCAGCCA
GGGGTGCTAC GAGGCTTTAA GTATGACCGA CTTAACTTCC GTAGCAATAT AAAATCCGAA
ATTAAACCGT GGGCTACTGT AGGTGTAAAC GTAGCTTTGG ATAGAGGTAA AACTGAACGT
CCTCGCCAAG GTCACGTAGA TACTTTCCTT TCTACTATAG CACAAGCTCC TACTTATAGA
CCTTTTACTC CTGATGGCAA ATATGTTTCT AAGGCTTACG ATTTCGAGCA AGCTAACAAG
AATATGCCTG CCATTATTGA TAGTGGAGCA CTTCGCAACA CTACCGAATA CAACTTATCG
GGTCAGTTGT GGGACGATAT TACTTTGACA AAAGGCTTGA ATTGGTATTC CAAATTAGCC
GTTACTTATT CCGATGAATC CTATAAAGAC TGGCGCCCTG TGGTACCTGT TTACAATTAT
CACACAGGAG CTGTAACGGG CGACCTCGAT GTAGGTGGTA AAGGTTTAAT TTCTAACAAC
GCTAAAAACT TTTATACCAA CTTCTTCACC TATCTAAAAT ACACTAAAAC CTTTGCAGAA
AACCATACCA TAGGCTTACA AGCAGGGTAT AGCCAAGAGT ACAATAATTA TCAGACCTTA
CAAGGTCATA GACGTGACTA TATAGCTAAT AACTTACACG AACTTGATGC GGGTACTACC
GCCATTCAAA CCAATAATGG TAATACAATA GAATGGGCTT TACAATCTTT CTTCGGAAGA
TTTAATTACA ATTATAAAGA ACGTTATTTG CTTGAAGCTA ATGTACGCTA TGATGGTACT
TCACGTATTG CTAAAGCTAA CCGTTGGGGT TGGTTTCCTT CTTTCTCAGC AGGCTGGCGC
ATTTCTGAAG AAAGCTTTAT CAAAGACACT CCTGCTATGC AATGGCTTAC CAACTTAAAA
ATACGCGGTT CTTACGGTCT ATTGGGCAAC CAAAATATAG GCAACTACCC TTATCAATCA
TTGCTCAACT ACACAGGAGC TTATCCGTTT GATAACACTA CCCTTTCTCC AGGAGTAGCA
CAAACAAGTT ATGCAAATAA CGATATCAAA TGGGAGTCTA CTTCCGTTAC CGATATAGGA
GTTGATATCA CTCTATTTAA GCGTATTTCT ATTGTGTATG ACTGGTATAA AAAGCACACT
TTTGATATAC TCCGTAGCGC ACAAGTAACA GGAGCATTAG GATTAAATGC TCCTACTATT
AACAGTGGTG AAATGGATAA TTATGGACAC GAACTCTCAG TGCAATATAA TCATTCTATC
AATAAAGGTC GTTTAGAAGG GTTGAGCTAT GGGGCTGGTT TCTATGTTGA TATTTCACGT
AACAAGTTAG TAAATTTTGG AGCGCGTGAA ATTGACGGTT ATAACCTTCG CGAAGATGGT
TTGCCTTATA ACTCCTTCTA TATGCTCGAG ATGATAGGCA TTTTCCAAAA CCAAGCCGAA
ATTGATAACT CTCCCAAACA ATTCAACGAC CCCGTACGTC CTGGTGATTT TAAATATCGC
GATGTAAATG GCGATGGCAA AATTGATAAC GATGACCGTA CTGTAGTAGA TGGTCGTTTC
CCTAAATACG AATATTCATT CAATGCACAT TTAGAGTATA AAGGTATCGA CTTCTCTGTC
CTCTTTCAAG GGGTAGAAGG TCGCAAAATC TATACTACGG GGTGGGGCTT AGACCCTTTT
CGTCAAGGTA CAGCTCCTAC TTTAGACTAT GTGAACAACC GTTGGCGTGG CGAAGGTACT
TCTAACAGCT ATCCACGTAT GTACTTTAAT CAAGTAGGCG ACGAACATAA CTGCCGCTTT
AACACTTGGT ATTTGCAAGA TGCCTCTTAC TTACGCTTGA AAAATATCAC CGTTGGGTTC
TCTTTCCCCG AAGATATCAT TTCTAAAGTA GGTCTAACCA AACTCAGAGT GTATTTCGCA
GGTGATAATC TATGGACTCT TACTGACTAT AAAGGATTAG ACCCCGAACG TGCTGGCGAC
GGACTCTTTG TCCAATACCC ACAAAATAAA ATCATTTCAA TGGGGTTAAA TGTAGAATTT
TAA
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| Protein sequence | MKRKIFLLLI ALWSTTSLLW AQNKQISGTV TDEKGTPLPG VSVQIKSTTR GVATDFDGKY
SIEASQGNVL LFSYMGYASQ EKTVGKGGGN SLIINVKLKE DTQELSEVVV VGYGSQKKEN
LTGAVAAVSA ETLTKRPVAN TATMLQGQVP GLRIVQGSGQ PGAESASIRV RGQGTYSSAG
SDPLVLIDGV PGSLANINPN DIENISVLKD AASASIYGAR AANGVILVTT KLGNDGHFKI
SYQNNFAIHT PTRMLKLVTN SAEYMRLFNE AKTNSGITDG HYTPEMIAAY ENATDRIQYP
NFDWIDYMFN PAFVQNHNLT LSGGAKGTLY NIALGYVDQP GVLRGFKYDR LNFRSNIKSE
IKPWATVGVN VALDRGKTER PRQGHVDTFL STIAQAPTYR PFTPDGKYVS KAYDFEQANK
NMPAIIDSGA LRNTTEYNLS GQLWDDITLT KGLNWYSKLA VTYSDESYKD WRPVVPVYNY
HTGAVTGDLD VGGKGLISNN AKNFYTNFFT YLKYTKTFAE NHTIGLQAGY SQEYNNYQTL
QGHRRDYIAN NLHELDAGTT AIQTNNGNTI EWALQSFFGR FNYNYKERYL LEANVRYDGT
SRIAKANRWG WFPSFSAGWR ISEESFIKDT PAMQWLTNLK IRGSYGLLGN QNIGNYPYQS
LLNYTGAYPF DNTTLSPGVA QTSYANNDIK WESTSVTDIG VDITLFKRIS IVYDWYKKHT
FDILRSAQVT GALGLNAPTI NSGEMDNYGH ELSVQYNHSI NKGRLEGLSY GAGFYVDISR
NKLVNFGARE IDGYNLREDG LPYNSFYMLE MIGIFQNQAE IDNSPKQFND PVRPGDFKYR
DVNGDGKIDN DDRTVVDGRF PKYEYSFNAH LEYKGIDFSV LFQGVEGRKI YTTGWGLDPF
RQGTAPTLDY VNNRWRGEGT SNSYPRMYFN QVGDEHNCRF NTWYLQDASY LRLKNITVGF
SFPEDIISKV GLTKLRVYFA GDNLWTLTDY KGLDPERAGD GLFVQYPQNK IISMGLNVEF
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