| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0195 |
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| Symbol | |
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| ID | 8366600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 234056 |
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| End bp | 238045 |
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| Gene Length | 3990 bp |
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| Protein Length | 1329 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644982615 |
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| Product | glycoside hydrolase family 2 TIM barrel |
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| Protein accession | YP_003140319 |
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| Protein GI | 256819040 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACT ATTTTAGAAC AGTAAGTACC CTGCTAAGTT TACTACTCTC TCCTTATTTA
TTAGCCCAGC ACAAGCCTTT GGGTGGTTTT GCTTATGGCA CTCTCTCAGC CCCTACGGGT
AAAGAATGGG AGTCAGTAGA AGAACTCTCG CTTAACAAAG AGTACCCCCG TGCTTATTTC
TTCTCGTTTA AAGACGAAAA GACGGCTACC CAAGTATTGC CTGAACATTC TCCCTATTGG
AAATCTCTCA ATGGACAATG GCAATTCCAC TGGTGCAAAA CTCCCGAAGA GCGTCCCAAA
GACTTCTATA AACCCGATTT CGACGCTTCT GCTTGGGAGT TGATTCCTGT ACCTTCTAAC
TGGAATATTC AAGGTATCCA AAAAAACGGT ACGCTCAAAT ATGGAGTGCC TATCTATGTA
AACCAACCCG TGATTTTCTA TCACGAGCGC AAGGTAGACG ATTGGCGTAA AGGAGTAATG
CGCACTCCTC CTAAAACGTG GACAACCTAT GAGTATCGCA ATGAGGTAGG CTCTTATATT
CGCGATTTTG AAGTACCTAC CGATTGGGAC GGTCGTGAAA TCTTCATCGA TTTCGATGGA
GTAGACTCTT TCTTCTACCT TTGGATTAAT GGGCAGTATG TAGGCTTTTC TAAAAACTCA
CGCAATGTGG CTTCTTTTGA TATTACCAAA TATCTACACA AAGGCAAGAA TAAAGTAGCC
GTAGAAGTAT ACCGCAATTC CGATGGTTCT TTTCTCGAAT CACAAGATAT GTTCCGCCTA
CCTGGTATAT TCAGAACAGT AGCCTTGCGC AGTACTCCTA AGGTGCAAAT CTTTAACCTC
AACATTCTTA CAGATACCCA AAACCTCACC GATTGGCAGT TAAAAGTCAA TGCCGAAGTG
CGTAACCTCA GCCCAAAAGC AGTCAAAGAT TATCAAGTGC GCTATAACGT ATACGAAGTC
TCATTGTATA AAGACGACGT TACCTCTACT GCTACCAAAG GAAGTATTCC CCTAAAAGCG
GTAGCTCCTA ACACTATCGA TAAAGTGAGC GGTACAATAA CCGTAAAGAA TCCTAAACTA
TGGTCGGCTG AGGAGTCTCA TCGTTATGTG CTCGTAGCTC AACTTTTGGA TAAAAAAGGG
AAGGTGGTAG AAACAGTATC GTCTTACTTT GGCTTTAGAA AAGTTGAAAT CAAAGATACT
AAGGCTGAAG ACGATGCTTT CGGAAAGGCA GGAAGGTATT ATTATCTCAA TGGTAAAACT
ATCAAATTTA AAGGCGTAAA CCGTCACGAA AGTCACCCCG CACAAGGACA CGTGCTCACA
CATCAACAAA TGGAAGAAGA GGTGATGATG ATGAAGCGAG CCAATATCAA CCACGTGCGC
AACTCTCACT ATCCACCCGA CCCTTATTGG TTTTACCTCT GCGATAAGTA TGGTATTTAT
TTAGAAAACG AAGCTAATAT AGAGTCTCAC GAGTATTACT ACGGCAAAGA ATCACTTTCT
CACCCTAAAG AATGGGAAAA GGCACATACA GCCCGCGTAA CCGAAATGGT AGAGGCTACC
TATAATTCGC CTGCCATTGT GATATGGTCA CTTGGTAATG AAGCAGGCCC TGGTCAGAAC
TTTGTAACGG CTTATAATCA CCTCAAAACA CTCGATACTT CTCGCCCTGT ACAATACGAG
CGCAATAACG ACATCGTAGA TATGGGCTCT AACCAATACC CTTCCGTAGC GTGGGTACAG
GGTGCTGCTA CAGGTAAGTA CGACATCAAA TATCCGTTTC ACATCTCGGA ATACGCACAT
TCTATGGGTA ATGCGGTAGG GAATCTCGCC GATTATTGGG AGGCTATCGA AAGCTCCAAC
TTTCTATGCG GAGGTGCTAT CTGGGATTGG GTAGACCAAG CGATGTACAA CTATACCAAA
GACGGCATTC GTTATCAAGC CTATGGAGGT GATTTTGGCG ATTTCCCTAA CGATGGTCAG
TTTGTGATGA ACGGCATTAT CTTTGCCGAT AGAACAGTAA AACCACAGTA CTACGAAGTG
CAGAAAGTGT ATCAGAATAT AGGCGTGAAA AAACTTAATA GTTTTACTTT TGAAATTTTC
AATAAAGGCT ATTTTACCGA TCTTTCAAAC TATGAGGGTA TATGGAAACT CTATAAGAAC
GGTGTGCTTG TAGAAGAGCG TCCTTTTGAA GTGCCTTCTG TGATGCCACA GCAAAAATCA
AGTGTGACCA TTACCTCTGT AACCTTAGAT AGCAATGAAG AATATTACAG TATTGTAGAA
TTCCGCCTTA AAGCAGATAC TCCTTGGGCT AAAAAAGGAT TTGTGCAAGC TCGCGAACAA
TTCTTAGTGC AACCTGCTAC CCAAAAGCCT TCTCTTTCTT CTGTAGCCAA AGGAGAAAAA
CTCACCCTTA GCAAAGACAA AAAGACCATT ACCGGAAAAG ACTTTTCAGT AACTTTTGAT
TTCGATAAAG GTACGATAGG CACACTCCGC TATGGTGAGC ATACTATTAT TGCCAACAGC
GACCTAAGTC TCAACGCTTT CCGCGCCTTC ACCAATAACG ACAACTGGAT ATACGAACAA
TGGTTCGAAA AAGGATTGCA TAACCTGCAT CATAAAGCCA TTGCTTCCTC TGTAAAACCT
AATAAAGAAG GTGGTTATAC ATTCTTTTTC ACGGTGGAAT CACAAGCGCC TAATGCAGCT
AAAATAACAG GGGGTGCGAG CTCAGGGCGC AATAAGATAG AGGAACTTAC TCACCAGAAG
TTTGGTGCAA ACGACTTCAA GTTCACTACC AACCAAATTT TCACCGTCTA TCCCGATGGC
TCTATCGAAC TACAAGCCAG CGTGGTGTCT AACGATGCCT CTTTGGTATT GCCAGAATTG
GGCTATTTAC TCAAACTGCC TAAGCAATAC GAAAATTTCA CCTATTACGG TCGCGGTAAA
CAAGATAATT ATCCCGACCG CAAATCGGGG GCTTTTGTAG GTCTCTACAG CGGTAAGGTA
GCCGATGAAT TTGTGCCTTT CCCTAAACCA CAAGATATGG GGCAACACCA AGAAACCCGC
TGGGCAGCTC TTACCAATGC TCAGGGCGCC GGCGCAGTGT TTGTGGGGGC TGAACCGCTA
TCGGTAGCAG CTTTACCTTA TAAAGCTATC GATATGACTT TGGCAGGACA CCCCTACCAA
TTACCAGAAT CTGATGGCGT GTACTTGCAA CTGAACATAG GCAACACAGG TTTGGGTGGA
CATAGTTGCG GTCCTCGTCC GTTGTTGCGT GACCGTTTGT TAGCAACCCC TCATAATTTC
GGTTTCATCA TTCGTCCAGC CAAAGAAGAT TTGCAAACCA TAACCAATGT AAGTGCAAGC
GGTGAGCAAC CTCTTTCTAT TACTCGTAGC AAAGTAGGAA AAGTATCTAT CAGTACAGCC
AATGCCCTTG CAACTATCTA TTACAGCATC AATAATAGCA AAGCACAGAA ATACACCCTT
CCTTTCGATT TGCCTAACGG AGGTATTGTA AAAGCATGGT TTGCAGGTAA TGAAACTCAG
AAATACACCC TTACTTTCGG TAAAGCCGAA AGCACGGCAA TGGAAGTAAT TTTCGCCAGC
AGTGAAGAAG CAGGCGTAGG TGACGCCAAA CATTTAGTAG ATGGCGACCC CAATACCATT
TGGCACTCCG CCTATTCAGT TACTGTAGCC AAACACCCAC ATTGGGTAGA TTTCGATATG
GGAAAGGTAG TTAATGTAAA AGGCTTTAGC TTTACCCAGC GCACTGATAG CTGGAGCGGA
AAGGTAAAAG ATTACCAAAT ACAACTGAGC AACGACGGTA AGAACTGGGG CGAACCCGTG
AAAGTAGGAG CTTTTAAAGA TGTGAGTAGC GCCCAACAAG TGTTGCTCGA CAAAGTTACA
AAAGCACGCT ATGTGCGTTT CACCGCCCTA AGTGATTTCT ATGGCGAAGA TTTCGCCACA
GGTGCCGAAT TTATGGTGAT ATTAGAATAG
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| Protein sequence | MKHYFRTVST LLSLLLSPYL LAQHKPLGGF AYGTLSAPTG KEWESVEELS LNKEYPRAYF
FSFKDEKTAT QVLPEHSPYW KSLNGQWQFH WCKTPEERPK DFYKPDFDAS AWELIPVPSN
WNIQGIQKNG TLKYGVPIYV NQPVIFYHER KVDDWRKGVM RTPPKTWTTY EYRNEVGSYI
RDFEVPTDWD GREIFIDFDG VDSFFYLWIN GQYVGFSKNS RNVASFDITK YLHKGKNKVA
VEVYRNSDGS FLESQDMFRL PGIFRTVALR STPKVQIFNL NILTDTQNLT DWQLKVNAEV
RNLSPKAVKD YQVRYNVYEV SLYKDDVTST ATKGSIPLKA VAPNTIDKVS GTITVKNPKL
WSAEESHRYV LVAQLLDKKG KVVETVSSYF GFRKVEIKDT KAEDDAFGKA GRYYYLNGKT
IKFKGVNRHE SHPAQGHVLT HQQMEEEVMM MKRANINHVR NSHYPPDPYW FYLCDKYGIY
LENEANIESH EYYYGKESLS HPKEWEKAHT ARVTEMVEAT YNSPAIVIWS LGNEAGPGQN
FVTAYNHLKT LDTSRPVQYE RNNDIVDMGS NQYPSVAWVQ GAATGKYDIK YPFHISEYAH
SMGNAVGNLA DYWEAIESSN FLCGGAIWDW VDQAMYNYTK DGIRYQAYGG DFGDFPNDGQ
FVMNGIIFAD RTVKPQYYEV QKVYQNIGVK KLNSFTFEIF NKGYFTDLSN YEGIWKLYKN
GVLVEERPFE VPSVMPQQKS SVTITSVTLD SNEEYYSIVE FRLKADTPWA KKGFVQAREQ
FLVQPATQKP SLSSVAKGEK LTLSKDKKTI TGKDFSVTFD FDKGTIGTLR YGEHTIIANS
DLSLNAFRAF TNNDNWIYEQ WFEKGLHNLH HKAIASSVKP NKEGGYTFFF TVESQAPNAA
KITGGASSGR NKIEELTHQK FGANDFKFTT NQIFTVYPDG SIELQASVVS NDASLVLPEL
GYLLKLPKQY ENFTYYGRGK QDNYPDRKSG AFVGLYSGKV ADEFVPFPKP QDMGQHQETR
WAALTNAQGA GAVFVGAEPL SVAALPYKAI DMTLAGHPYQ LPESDGVYLQ LNIGNTGLGG
HSCGPRPLLR DRLLATPHNF GFIIRPAKED LQTITNVSAS GEQPLSITRS KVGKVSISTA
NALATIYYSI NNSKAQKYTL PFDLPNGGIV KAWFAGNETQ KYTLTFGKAE STAMEVIFAS
SEEAGVGDAK HLVDGDPNTI WHSAYSVTVA KHPHWVDFDM GKVVNVKGFS FTQRTDSWSG
KVKDYQIQLS NDGKNWGEPV KVGAFKDVSS AQQVLLDKVT KARYVRFTAL SDFYGEDFAT
GAEFMVILE
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