Gene Coch_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0187 
Symbol 
ID8366592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp224577 
End bp224957 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content39% 
IMG OID644982607 
Productglycine cleavage system H protein 
Protein accessionYP_003140311 
Protein GI256819032 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID[TIGR00527] glycine cleavage system H protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.717665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTTC CATCTGATTT AAAATACACT AAAGAACACA TATGGGTGCG CATCGAAGGT 
GATATAGCCA CAGCAGGCAT TACCGATTTT GCACAACACC AATTAGGCGA CATTGTGTAT
GTGGAAGTAG AAACCATAGG CGATACCCTT AATGAAGATG AAATATTTGG CAGTATCGAA
GCCGTAAAAA CAGTATCCGA TTTATTTATG CCCCTCACGG GCGAAGTAAT CGCGTTTAAT
GAACCGCTAA ACCAAAAACC TGAGAAAGTA AATACCGACC CATATGGCAA AGGGTGGATA
ATACAACTGA AAATAAGCGA TATTACCCAG TTAGATAATC TACTCTCAGC CGAAGCTTAT
AAAACCCTAA TAAATGCTTA A
 
Protein sequence
MNFPSDLKYT KEHIWVRIEG DIATAGITDF AQHQLGDIVY VEVETIGDTL NEDEIFGSIE 
AVKTVSDLFM PLTGEVIAFN EPLNQKPEKV NTDPYGKGWI IQLKISDITQ LDNLLSAEAY
KTLINA