Gene Coch_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0181 
Symbol 
ID8366583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp215623 
End bp216633 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content43% 
IMG OID644982598 
Producttetraacyldisaccharide 4'-kinase 
Protein accessionYP_003140305 
Protein GI256819026 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1663] Tetraacyldisaccharide-1-P 4'-kinase 
TIGRFAM ID[TIGR00682] tetraacyldisaccharide 4'-kinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.391612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAT GGGTTAAATA TCTTTTTAAA ATACTTCTTT CCCCTTGGGC GTGTTTGTAT 
GGTGCAATAG TTCGTCTGCG CCATTGGAGC TACAACGTGG GTATCTTTAA AGAACATACT 
TTTGCTGTAC CTACTATTTG CGTGGGCAAT GTAGCAGTAG GAGGGACAGG TAAGAGCCCA 
ATGGTGGAAT ACCTCATCAG GCGATGGCAT AAACAGCGTA GAGTGGGCGT GCTCAGTCGT 
GGTTATAAAC GCAAGACAAG GGGCTTTATA TTAGCTACCG AGACTTCTAC GGTATTGGAT 
TTAGGTGATG AACCTTTCCA ATTTTGGTGG AAATTTAAGG ATATTATCTT AGCTGTTTGT 
GCCAACCGAG TAGAAGGTGT AGAACGAATG CTCGCCTTGC CTATGCCTCC TGAACTCATT 
ATATTAGACG ACGCTTTCCA ACATCGCCCC GTAAAAGCAA AAATCAACAT AGTGCTCACC 
GCTTACGGAC ATCTGTTTAC TGACGACTGG CTACTGCCAA TGGGGCGACT CCGCGATGTA 
GTAAGCCGAG TGCAACAAGC CGATATAGTG GTTGTAACTA AATGTCCTCC CTCATTGTCA 
GAAAAAGAAC GTACTCAGCT TATAGCGCGT TTACAGAAGC ATTGCCTTTG TCCTATAGTC 
TTTACAACCA TTGCCTACGA TAAGCAAGTA TTTTCAGAGA CGGAAAACAT ATCTTTGACG 
ACTTTCATTC AAGAACCTTT TACTTTGGTA ACAGGCATTG CCAATCCGAA TCCGCTACTC 
ACATTCTTGA AAGAACAAGG AGCAGATTTT CAGCATTTAG CTTTTGCCGA CCATCATCAT 
TTTACCGAGA GAGAAATACA GCAATTGCAA GGTAAGCGAA TCCTAACCAC TGAGAAAGAC 
TACGTGCGCC TGCAACCTCA TTTGCAAGAC TTGTACTACC TGCCTATCGC AATGCAATTC 
CTCACCCCCA CTGATGAACA TACATTTGGC ACGGTTTTTG AAAATCTATA A
 
Protein sequence
MRKWVKYLFK ILLSPWACLY GAIVRLRHWS YNVGIFKEHT FAVPTICVGN VAVGGTGKSP 
MVEYLIRRWH KQRRVGVLSR GYKRKTRGFI LATETSTVLD LGDEPFQFWW KFKDIILAVC 
ANRVEGVERM LALPMPPELI ILDDAFQHRP VKAKINIVLT AYGHLFTDDW LLPMGRLRDV 
VSRVQQADIV VVTKCPPSLS EKERTQLIAR LQKHCLCPIV FTTIAYDKQV FSETENISLT 
TFIQEPFTLV TGIANPNPLL TFLKEQGADF QHLAFADHHH FTEREIQQLQ GKRILTTEKD 
YVRLQPHLQD LYYLPIAMQF LTPTDEHTFG TVFENL