| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0180 |
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| Symbol | |
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| ID | 8366582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 214625 |
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| End bp | 215626 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644982597 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_003140304 |
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| Protein GI | 256819025 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.094979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTTTAG TAACTGGCGG AACAGGGCTG ATTGGCAGCC GCTTGCTTTT TTACCTTACT
CAAAACAAGG AGCATAAAGT AAGGGCTATC TATCGTAATG CCCATTCATT AGAAAAAATC
GAACAACTTT TTATACAACA ATCCCCCAAT GGAGCGGAAC AATTCCGCTC TATTGAATGG
GTAGAAGCCG ATATAAGTAA CATTCCCGCA CTCGAACAAG CGTTTGCGAA TATTTCTTTT
GTTTTTCACT GTGCAGGCTT TATCTCTTAC CAACCTAAAG ATTTTGCTCA GCTCATCAAA
GTGAATGTGG AAGGAACGGC TAATATCGTA AACTTGTGTA TTGACTTTAA GGTAAAAAAA
CTCTGTTATG TGAGCTCTGT AGCTACCCTT TCGGCTTTGC CTCACACACC TATTGATGAG
AAAAACGACT GGAATAGTGA GGACAATAAC ACTGATTACG CTATCAGTAA GAACGGTGGC
GAAATGGAGG TATGGCGTGG CTCGCAAGAA GGATTGCCAG TGGTTATTGT AAATCCTTCA
GTGGTGTTGG GTGCTGATTT CTCTGAACAA GGCTCTGGCT TGTGGTTTAA AAAAGTAGCT
GATGGACAGA AATATTACCC CACAGGGGGT ACAGGTTTTG TCGCGGTAGA CGATGTCGTA
CGTGCAATGA TTGCCTTACA ATTCTCCGAA GTTACGGGAG AACGCTTTGT GCTGAATACG
GCTAACCTTA CTTATCAATC ACTTTTTGAG AAGATAGCCA AAGGATTAGG AGTGAAAGCT
CCTACTAAAA AGATTTCTCA TAAAGTATTG CGTCGTTTGG CACGTTTAGA CGGCTTTTTG
AGTTTCTTGG GTATCAAAAA ACGAACCCTC ACTCTCCAAA CAGCCGATGC TCTCGGCTTA
ATAAGAACTT ATAATGGCAA TAAAATAAAA GAGTTTATCG ATTTTCAGTA CAGTGATATC
GATGAAGTAA TCCAAGAGAT TTGTGCAAAA TATCCACTAT GA
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| Protein sequence | MILVTGGTGL IGSRLLFYLT QNKEHKVRAI YRNAHSLEKI EQLFIQQSPN GAEQFRSIEW
VEADISNIPA LEQAFANISF VFHCAGFISY QPKDFAQLIK VNVEGTANIV NLCIDFKVKK
LCYVSSVATL SALPHTPIDE KNDWNSEDNN TDYAISKNGG EMEVWRGSQE GLPVVIVNPS
VVLGADFSEQ GSGLWFKKVA DGQKYYPTGG TGFVAVDDVV RAMIALQFSE VTGERFVLNT
ANLTYQSLFE KIAKGLGVKA PTKKISHKVL RRLARLDGFL SFLGIKKRTL TLQTADALGL
IRTYNGNKIK EFIDFQYSDI DEVIQEICAK YPL
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