Gene Coch_0177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0177 
Symbol 
ID8366579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp213474 
End bp214130 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content36% 
IMG OID644982594 
Producthypothetical protein 
Protein accessionYP_003140301 
Protein GI256819022 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00582655 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAAT CTATTAAAAA CTTTGTTTTT ATGTCTATCT TAGCTTTAAC TTACCTTCTA 
CTTAGGTTCG TTCATCTTTT GTCTTTTCTT CGTTCATTGT TCATTTGCCC GTGCGGCTCG 
CACCGTCATT TGTTCGTCAT TTGTTCGTTC ATTGTTCGTC TTTTGTTCGT CTTTTGTTCG 
TTCATTGTTC GTCTTTTGTT CGTCTTTTGT TCGTCTTTTG TTCGTCTTTT GTTCGTCTTT 
TGTTCGTCTT TTGTTCGTCT TTTGTTCGTC TTTTGTTCGT CTTTTGTTCG TTCATTGTTC 
GTCTTTTGTT CGTCTTTTGT TCGTCTTTTG TTCGTCTTTT GTTCGTCTTT TGTTCGTCTT 
TTGTTCGTCT TTTGTTCGTC TTTTGTTCGT CTTTTGTTCG TCTTTTGTTC GTCTTTTGTT 
CGTCTTTTGT TCGTCTTTTG TTCGTCTTTT GTTCGTCTTT TGTTCGTCTT TTGTTCGTCT 
TTTGTTCGTC TTTTGTTCGT CTTTTGTTTA TCTGCCCGTG CGGTTCGCAC CGTCTTTTAT 
TTGGTTACTC TTTGTTTAGT TACCTATCGT ACTACGACCT CGCATCATCA TCGATTTAGT 
ATTATTGGCT TTATTGACAT TTTTGATATT ATTACTTTTT TTTCACTACT TTACTGA
 
Protein sequence
MLKSIKNFVF MSILALTYLL LRFVHLLSFL RSLFICPCGS HRHLFVICSF IVRLLFVFCS 
FIVRLLFVFC SSFVRLLFVF CSSFVRLLFV FCSSFVRSLF VFCSSFVRLL FVFCSSFVRL 
LFVFCSSFVR LLFVFCSSFV RLLFVFCSSF VRLLFVFCSS FVRLLFVFCL SARAVRTVFY 
LVTLCLVTYR TTTSHHHRFS IIGFIDIFDI ITFFSLLY