Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0170 |
Symbol | |
ID | 8366572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 206004 |
End bp | 207863 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644982587 |
Product | Citrate transporter |
Protein accession | YP_003140294 |
Protein GI | 256819015 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATACCA CTCTTATCAT TCTTTTTATA TCGGCTTTAT TTTTTATGAG CGGGAAGGTG CGCTCCGATT TGGTAGCTAT GTGTGCCTTA GTGCTCTTAG TGCTCTTTGG CATATTAACC CCTGAGCAAG CTTTATCGGG CTTTTCGGAC AAGGTAGTAG TGATGATGAT AGGGCTCTTT GTGGTAGGAG GCGCTATTTT CCAAACGGGA TTAGCAAAGA TGATGAGCAG TAAAATCTTA CGCTTGGCAG GCGATAGCGA GGTAAAACTC CTTATCTTGG TAATGCTCGT TACGGCTTTT ATTGGGGCTT TTGTAAGCAA TACAGGTACG GTAGCCTTGA TGATGCCCAT AGTGGTGAGT ATGGCAATGA GTGGTAACAT CAACAGTAGT CGCCTGCTGA TGCCTATGGC TTTTGCCAGT AGTATGGGCG GTATGATGAC GCTCATCGGT ACGCCTCCTA ACTTGGTAAT CGATGGAGAG TTAGTGAAAA ACGGCTACGA TAAACTCACT TTCTTTTCCT TTACTCCAGT GGGATTGGTG TGTTTGGCAA TAGGACTGTT AGTTTTAATT CCCACCAGTA AGTTTTTTCT TTCTAAAAAA GGTGATTCTA AGCAAGAAGG GAACCGAAAT GGCAAATCAC TTACCGATTT GGTACGTGAA TATCAACTCT CCAACAACTT ATATCGCGTA TTAGTAGAAG GAAACACTTT ATTTATAGGT AAAACGCTCA AAGAAATCAA CCTTTCGCAA CGTTATCACA TTTCGGTATT AGAAATCAGA CGCAAACCTA CTTCTAACAA TCCTTTTTTC AAAACAGGCA ACCAAGAGGT AGTAAATGCT GACACCGTAA TTTATGAAGG AGATATTCTT TATTTGCGCG GTAGCTTTGA GTCGATTGAA CAAATGAACG CCGAAAATCA CTTAAACTTT CTCGACACAC ACCACCCCGA ACAACGCTTG CCTAACGAGT TGCACTTCCA CGATATAGGC ATAGCCGAAG TACTGATAAT GCCTGCTTCG AAATTGGTTA ACACCCGCAT CAGTGATAGC AAACTGCGCG AACACTTTGG GCTCAATATC TTAGGTATTC AGCGCAAGGA TAACTATATT TTGCAAAACT TAAAAGACGA AAAGATGCAC GCTGGCGACA TACTATTGGT ACAAGGAACT TGGGAGCACA TTGCTAAAAT GGACGCTGAA CGCAGTCAGT TGGTAGTATT AGGGCAACCT CTTGCAGAGG CATCTAAGGT AACCCTCACC CACAAAGCTC CTATCGCTGC GCTAATAATG GTAGGAATGG TAGTCGCGAT GATGTTCGAT TTTATCCCCA TAGCACCCGT TACTGCTGTG CTTATCGCCT CTTTATTGAT GGTTATTTCA GGAGCTTTGC GCAATATTGA AGCTGCTTAT AAGACGATTA ACTGGGAGAG TATTGTACTC ATTGCAGGTA TGCTTCCTAT GGCATTAGCC TTGGAAAAAA CAGGAGTATC AGCCTTAGTA TCGAATGCAT TAGTAGGGAG TTTAGGCGAT AAGAGTCCAT ATATACTCTT GGCAGGCGTG TATTTTACCA CTTCGCTTAT GACGATGTTC ATCAGCAATA CCGCTACAGC CGTACTCTTG GCACCCATTG CTATTAAAAC CGCCTTATCG TTAGGCTTAC AGCCCCACGC TTTTATGTTT GCAGTAGCCG TAGGTGCAAG TATGTGTTTT GCTTCTCCTT TCTCCACTCC GCCCAATGCA TTAGTAATGT CGGCTGGGCG TTACACTTTT ATGGATTACG TGAAAGTGGG CTTACCTCTG CAAATCATTA TGGGGATTGT AATGGTATTC GTATTGCCAT TATTATTCCC ATTTCAATAA
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Protein sequence | MYTTLIILFI SALFFMSGKV RSDLVAMCAL VLLVLFGILT PEQALSGFSD KVVVMMIGLF VVGGAIFQTG LAKMMSSKIL RLAGDSEVKL LILVMLVTAF IGAFVSNTGT VALMMPIVVS MAMSGNINSS RLLMPMAFAS SMGGMMTLIG TPPNLVIDGE LVKNGYDKLT FFSFTPVGLV CLAIGLLVLI PTSKFFLSKK GDSKQEGNRN GKSLTDLVRE YQLSNNLYRV LVEGNTLFIG KTLKEINLSQ RYHISVLEIR RKPTSNNPFF KTGNQEVVNA DTVIYEGDIL YLRGSFESIE QMNAENHLNF LDTHHPEQRL PNELHFHDIG IAEVLIMPAS KLVNTRISDS KLREHFGLNI LGIQRKDNYI LQNLKDEKMH AGDILLVQGT WEHIAKMDAE RSQLVVLGQP LAEASKVTLT HKAPIAALIM VGMVVAMMFD FIPIAPVTAV LIASLLMVIS GALRNIEAAY KTINWESIVL IAGMLPMALA LEKTGVSALV SNALVGSLGD KSPYILLAGV YFTTSLMTMF ISNTATAVLL APIAIKTALS LGLQPHAFMF AVAVGASMCF ASPFSTPPNA LVMSAGRYTF MDYVKVGLPL QIIMGIVMVF VLPLLFPFQ
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