| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0145 |
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| Symbol | |
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| ID | 8366547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 168950 |
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| End bp | 170185 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644982564 |
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| Product | integrase family protein |
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| Protein accession | YP_003140271 |
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| Protein GI | 256818992 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.468231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG TAAAACGCTC AACCTTTAAG GTATTGTTTT ACCTTAAAAA GAATGCCCCA
AAGAAGAACG GTAAGGTTGC TATTATGGGG CGTATTACCA TTGACAATCA GGTAGCTCAG
TTTAGTACCA AACTTGAAAT CCTTCCACAG AAATGGGATT TGAAGTACGG AAGGGTAACA
GGTAAAACAG AAGAAGCTAC CCAACTTAAT CGCAAGCTGG AAGAGATTCG CTCACGTATC
ATTACTCATT ATGAGGAGTT GATGAAGTAC GAGGGAGTGG TTACTGCTCA GAAGCTAAAA
GCTACTTTTC TAGGCATAGG AGTAATGGAA GATTCCTTGC TAAAAGTCTA TGAGAATTTC
AAAGAAGGCT TTGCCTTGAT GGTAGAAAAA GGTGTTAGAA GTTACAGCAC TCTTAACAAA
TATGAGAATG TATATACTCA TTTGAGCGAG TTTATCCAGT ATAAATACCG CAGAAGTGAT
ATTTCTTTCA AAGAGCTTAC AGAAGACTTT ATCAACGATT TTGATTTCTA TCTTAGAGTT
AATAAAAGTC TTACTCACAA CACAATATGG GTTTATATGA TGCCCCTTTG TAAAATGGTA
GAAATAGCCA TAGACAAAGG AATTATCTAT CGCAATCCTT TTAAGAATTA TATAAGTTCT
ATGGAGGAGA AAGATAGAGG CTATTTGCTT AGAGAGGAAG TAGAAACTCT TTTACAATAT
CACCCTAAGA GTGCTTCTGC TGAATTAGTA CGAGACCTAT TTGTTTTTAG TTGCTTTACA
GGCTTCTCTT ATATTGATAT CAAACAACTT AAAAGAAGCC ACTTACAATC GTTCTTTGAC
GGCAACAAAT GGCTTATCAA ACGCCGTCAG AAATCCGATG TGCCCTGTAA TGTACGTCTG
TTAGATATAG CCGAGAAAAT TATTGAAAAA TATGAGGGTA CGACTCGTAC AGAGGCACTA
TTTCCTACAC CCTCCAATGC TAATTGCAAC CTCCTGATTA AAAAGATGAT GAAAGATTGC
AACATCATTC GTGAAAAACC TATCTCCTTT CACTGGGCAC GCCATACCTT TGGTACTCTG
TTCTTAACAG AAGGGGTTCC CTTGGAAAGT GTTAGTAAGA TGATGGGACA TAAGAATATC
AAAACTACCC AGATTTATGC TAAAATCACC AATGAGAAAA TCAGCAAGGA TATGGAAATT
GCTGCCGAAC GATTAAAGAA TTTAAAGATA GGATAG
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| Protein sequence | MKKVKRSTFK VLFYLKKNAP KKNGKVAIMG RITIDNQVAQ FSTKLEILPQ KWDLKYGRVT
GKTEEATQLN RKLEEIRSRI ITHYEELMKY EGVVTAQKLK ATFLGIGVME DSLLKVYENF
KEGFALMVEK GVRSYSTLNK YENVYTHLSE FIQYKYRRSD ISFKELTEDF INDFDFYLRV
NKSLTHNTIW VYMMPLCKMV EIAIDKGIIY RNPFKNYISS MEEKDRGYLL REEVETLLQY
HPKSASAELV RDLFVFSCFT GFSYIDIKQL KRSHLQSFFD GNKWLIKRRQ KSDVPCNVRL
LDIAEKIIEK YEGTTRTEAL FPTPSNANCN LLIKKMMKDC NIIREKPISF HWARHTFGTL
FLTEGVPLES VSKMMGHKNI KTTQIYAKIT NEKISKDMEI AAERLKNLKI G
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