Gene Coch_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0132 
Symbol 
ID8366534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp154186 
End bp154635 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content40% 
IMG OID644982551 
Productthioesterase superfamily protein 
Protein accessionYP_003140258 
Protein GI256818979 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00894639 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAGC CAAAAGAAAC GTATAAACCA ATTGATTTAT CTGAGAGTCT TATTATTACG 
GTACGCTTTA GCGAAACCGA CCCGCTTGGT ATTGTGTGGC ACGGCAACTA CATCAAATAT 
TTTGAAGACG GACGTGAGGC GTTTGGGAGA AAGTACGGTA TTTCTTACCT TGATGTAGAG 
CGCGAAGGCT ATGCGACCCC TATTGTGAAG AGCGTATGCG AACACAAGAA AATGGTGCGC 
TATGGCGAAC GCTTACGTAT TGAAACTCAC TATATCCCTA CAACAGTCGC TAAACTCATC 
TTTCAGTATT TTATCTACAA CGAAGCTAAT GAGTTAGTTT GTACGGGAGA AACTGTACAA 
GTGTTTACTT CTCTAAAAGA TAATAGCTTA TCGCTGTATA AACCAGCGTT TTTTGAAGAA 
TGGGAGAAAC AAATAACAAG TAACAGGTAA
 
Protein sequence
MTKPKETYKP IDLSESLIIT VRFSETDPLG IVWHGNYIKY FEDGREAFGR KYGISYLDVE 
REGYATPIVK SVCEHKKMVR YGERLRIETH YIPTTVAKLI FQYFIYNEAN ELVCTGETVQ 
VFTSLKDNSL SLYKPAFFEE WEKQITSNR