Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0128 |
Symbol | |
ID | 8366530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 148230 |
End bp | 148793 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644982547 |
Product | protein of unknown function DUF479 |
Protein accession | YP_003140254 |
Protein GI | 256818975 |
COG category | [S] Function unknown |
COG ID | [COG3124] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00458554 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTTT TAGCTCATAT TTACCTTTCG GGCGAAGGCG ATGAACTGCT CACTATTGGC AACTTTATCG CCGATACCGT ACGAGGCAAA GAATACTTAC AATACCCCGA AGCAATGCAA CGGGGTATTT TATTACATCG TAGAATAGAC ACTTTCACCG ATGCACACAC TATTTTCCGG AAAAGTAAAC ACCGATTGGT GCCTACTTAC AACCATTACG CAGGGGTGCT GGTAGATATT TTTTACGACT ATTGTCTTGC TAAACATTGG AAAGAATATT CTGATAAATC CTTAGAACAA TATGCTCAAC ACTTCTACGA TGCCTTAGAA CGCCATCAAC ACTTGCTCAA CGATAAAGCT CAAACTTTGA GCAAATACAT CATTGCCGAA CGTTGGTTAG AAAGCTATCA AACCTTTGAA GGCATCTGCT CCATATTATA CCGAATGGAT AGGCGTACAG ACTTTGTTTC GAAAATGCAA TATGCCATAG AAGATTTAAA AAGAGATGAA AAATTATATG AAGAAGAATT TACTCAGTTC TTTAAAGAAA TACAAATGAT GTAA
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Protein sequence | MNFLAHIYLS GEGDELLTIG NFIADTVRGK EYLQYPEAMQ RGILLHRRID TFTDAHTIFR KSKHRLVPTY NHYAGVLVDI FYDYCLAKHW KEYSDKSLEQ YAQHFYDALE RHQHLLNDKA QTLSKYIIAE RWLESYQTFE GICSILYRMD RRTDFVSKMQ YAIEDLKRDE KLYEEEFTQF FKEIQMM
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