Gene Coch_0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0128 
Symbol 
ID8366530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp148230 
End bp148793 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content38% 
IMG OID644982547 
Productprotein of unknown function DUF479 
Protein accessionYP_003140254 
Protein GI256818975 
COG category[S] Function unknown 
COG ID[COG3124] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00458554 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTTT TAGCTCATAT TTACCTTTCG GGCGAAGGCG ATGAACTGCT CACTATTGGC 
AACTTTATCG CCGATACCGT ACGAGGCAAA GAATACTTAC AATACCCCGA AGCAATGCAA
CGGGGTATTT TATTACATCG TAGAATAGAC ACTTTCACCG ATGCACACAC TATTTTCCGG
AAAAGTAAAC ACCGATTGGT GCCTACTTAC AACCATTACG CAGGGGTGCT GGTAGATATT
TTTTACGACT ATTGTCTTGC TAAACATTGG AAAGAATATT CTGATAAATC CTTAGAACAA
TATGCTCAAC ACTTCTACGA TGCCTTAGAA CGCCATCAAC ACTTGCTCAA CGATAAAGCT
CAAACTTTGA GCAAATACAT CATTGCCGAA CGTTGGTTAG AAAGCTATCA AACCTTTGAA
GGCATCTGCT CCATATTATA CCGAATGGAT AGGCGTACAG ACTTTGTTTC GAAAATGCAA
TATGCCATAG AAGATTTAAA AAGAGATGAA AAATTATATG AAGAAGAATT TACTCAGTTC
TTTAAAGAAA TACAAATGAT GTAA
 
Protein sequence
MNFLAHIYLS GEGDELLTIG NFIADTVRGK EYLQYPEAMQ RGILLHRRID TFTDAHTIFR 
KSKHRLVPTY NHYAGVLVDI FYDYCLAKHW KEYSDKSLEQ YAQHFYDALE RHQHLLNDKA
QTLSKYIIAE RWLESYQTFE GICSILYRMD RRTDFVSKMQ YAIEDLKRDE KLYEEEFTQF
FKEIQMM