Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0127 |
Symbol | alaS |
ID | 8366529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 145597 |
End bp | 148230 |
Gene Length | 2634 bp |
Protein Length | 877 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644982546 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_003140253 |
Protein GI | 256818974 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0445567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTCGC AAGAAATAAG AGAACAATTC CTAAAATTCT TTGAAAGCAA AGGGCACACT ATTGTTCCCT CGGCTCCTAT GGTGGTTAAA AACGACCCTA CCCTGATGTT TACCAACGCT GGTATGAACC AATTTAAAGA GTTCTTCCTT GGTAATGCTA AACCTAAATA CAAACGCGTA GCCGATACTC AAAAGTGTTT GCGCGTATCG GGTAAGCACA ACGATTTGGA AGAGGTAGGT CGGGACACGT ATCACCACAC GATGTTTGAG ATGCTTGGCA ACTGGTCGTT TGGCGATTAC TTCAAAAAAG AAGCCATTAG CTGGGCGTGG GAATTGCTCA CCGAAATATA CAAAATTCCC AAAGAAAACC TCTATGTAAC CGTTTTTGAA GGCAGTGAAG AAGACGGCGT GCCTTTTGAC CAAGAAGCCT ATGATATATG GAAAGAACGG ATTGCCGAAA ACCATATACT TCTCGGAAAT AAAAAAGATA ACTTTTGGGA AATGGGTGAC CAAGGTCCTT GTGGTCCTTG TACCGAAATT CACGTGGATA TCCGTTCAGA TGAAGAAAAA GCCAAAGTGC CAGGTCGCGA CCTTGTGAAT AACGACTACC CTCAGGTAAT TGAGATTTGG AACAATGTGT TTATGGAGTT CAACCGCAAA GCCGACGGTA GTCTCGAAAA ACTACCTTCT CGCAACGTGG ATACAGGTAT GGGTTTTGAA CGCCTCTGTA TGGTTTTGCA GAAGAAACAA TCAAATTACG ATACCGATGT GTTTACCCCA CTGATTCACA AAGTGGAAGA GATTACCCAA AGTAGATATA CCTCAGGCGA CCGTGTAACT GCTGAACAAG AACAAGTAAA CATTGCCATT CGTGTGATTT CAGACCATAT TAGGGCTGTG GCTTTTGCTA TTACCGACGG TCAGTTGCCC TCTAACAATG GTGCTGGTTA TGTGATACGC CGTATTTTGC GTCGTGCTAT TCGCTATGGT TTTACTTTCT TAAACCAAAA AGAGCCGTTT ATCTACAAAT TAGTAGAGAC ACTCTCTAAC CAAATGGGAG GTACTTTCCC CGAATTGGAG AAACAGCAAT TCCTGATTAT GAGCGTCATA AAAGAAGAAG AAGCCTCTTT CTTGCGCACG CTTGAACAAG GTTTGCTAAT GCTAGATGTG ATGATACAAA ACAGTCCTGG CAAGCAACTA TCGGGCGGTA AAGCCTTTGA ATTATACGAT ACTTACGGCT TCCCCAAAGA TTTGACAGCG CTCATTCTTT CGGAGAAAGG GCTCACTATG GACGAAGCTA GTTTTGAAGA ACAATTACAA AAACAAAAAG AGCGTTCACG TGCAGCAGCT CAAATAAAAG CTGACGACTG GGTAATACTC CGCGACGACG ATGAAGAGGA GTTTATAGGC TATGATACCT TAGAGGCTGT GGTGCGATTG GTGAAATACC GCAGAGTGGA AAGTCAGAAA GACGGTACTC ATTTTCAGCT GGTATTCAAC ACTACTCCTT TCTATCCGGA AGGAGGTGGA CAAGTGGGTG ATAAAGGTAC TCTACAAAGT GCTAACGGTG AGCTTATCTA TATTTTAGAT ACCAAAAAAG AAAATAACCT TATCATTCAC ATTTCAGAAC ACCTGCCTAC TAATTTAAAC GACCCTTTCA AAGCAGAAGT ACATTCAATA TCACGTGAAA TGGCAGAAGC TAACCACAGT GCTACCCACC TATTACACCA AGCCCTACGC GAAGTATTGG GTACACACGT TGAACAGAAG GGCTCTCGTG TAGCTCCTGA AACTTTGCGC TTCGACTTCT CTCACTTTGC TAAACTTACT GAGGAAGAGC TCAAAAAGGT AGAGCAATTG GTAAACAGAC GTATTTTTGA AAAAATTCCT TTGCAAGAGC ATCGTAATAT TCCTATGCAA CAAGCAGTGG AATCAGGAGC TATGGCACTC TTTGGTGAAA AGTACGGCGA CCGTGTGCGT ATGATTCAGT TTGGTGATAG CAAAGAGCTT TGTGGGGGAA CTCACGTAAA GAACACAGGC GATATTTGGT ATTTCAAAAT CATCTCAGAA GGTGCAGTAG CAGCAGGTAT TCGCCGTATT GAAGCGATTA CCCGTGGAGG AGCTATGAAG TATTTTACAG AACAAGAACA GCTGGTAGAA CAAATAAAAG AAACGCTGAA AAACGCGCAA GACCCTGTAA AAGCGATTAG GCACTTGCAA GAAGAAAATG CAGCTTTACA CAAAGAGCTT GAACAGTTGA GAAAAGAACA AGCTAAACAA CTTAAAACAA GCATCAAAGC TGAATTTACA GAAGTAAATG GTGTTCAGTG TCTCGTAAAA CAAGTAGATG CAGAAGTGGC AACTCTCAAA GACCTTGCTT TCGAGTTAGG TAATGAGGTG AAAAATGCTT TTATATTCTT TGCATCAGCT CACGAAGAAG GCAAAGCACT CTTGTTATGC TATATCAATA AAGATTTGGC ACAAGCCAAA GGATTAGATG CTGGTAAGAT AGTACGAGAA CTGGGCAAAT ACATTCACGG AGGAGGTGGC GGACAGCCAT TCTTTGCAAC CGCAGGAGGT AAAAACCCCG GTGGTATTAC CGAAGCACTT TCTAAGGTTA AAGATTATTT ATAA
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Protein sequence | MTSQEIREQF LKFFESKGHT IVPSAPMVVK NDPTLMFTNA GMNQFKEFFL GNAKPKYKRV ADTQKCLRVS GKHNDLEEVG RDTYHHTMFE MLGNWSFGDY FKKEAISWAW ELLTEIYKIP KENLYVTVFE GSEEDGVPFD QEAYDIWKER IAENHILLGN KKDNFWEMGD QGPCGPCTEI HVDIRSDEEK AKVPGRDLVN NDYPQVIEIW NNVFMEFNRK ADGSLEKLPS RNVDTGMGFE RLCMVLQKKQ SNYDTDVFTP LIHKVEEITQ SRYTSGDRVT AEQEQVNIAI RVISDHIRAV AFAITDGQLP SNNGAGYVIR RILRRAIRYG FTFLNQKEPF IYKLVETLSN QMGGTFPELE KQQFLIMSVI KEEEASFLRT LEQGLLMLDV MIQNSPGKQL SGGKAFELYD TYGFPKDLTA LILSEKGLTM DEASFEEQLQ KQKERSRAAA QIKADDWVIL RDDDEEEFIG YDTLEAVVRL VKYRRVESQK DGTHFQLVFN TTPFYPEGGG QVGDKGTLQS ANGELIYILD TKKENNLIIH ISEHLPTNLN DPFKAEVHSI SREMAEANHS ATHLLHQALR EVLGTHVEQK GSRVAPETLR FDFSHFAKLT EEELKKVEQL VNRRIFEKIP LQEHRNIPMQ QAVESGAMAL FGEKYGDRVR MIQFGDSKEL CGGTHVKNTG DIWYFKIISE GAVAAGIRRI EAITRGGAMK YFTEQEQLVE QIKETLKNAQ DPVKAIRHLQ EENAALHKEL EQLRKEQAKQ LKTSIKAEFT EVNGVQCLVK QVDAEVATLK DLAFELGNEV KNAFIFFASA HEEGKALLLC YINKDLAQAK GLDAGKIVRE LGKYIHGGGG GQPFFATAGG KNPGGITEAL SKVKDYL
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