| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0114 |
|---|
| Symbol | |
|---|
| ID | 8366516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 135838 |
|---|
| End bp | 136650 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644982533 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003140240 |
|---|
| Protein GI | 256818961 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA ACCTTAACAC CACTTCCACT CCCTATAACG GCTTGTTCCC TCTCCTTGGG
AGAGGGGGAA CGGGGGTGAG GACAGCCATA CAATGTAACA ACCTAACAAA GCAATTCGGC
GATTTCAAAG CCGTGAACAA CATTTCCCTT ACCGTTGAAA AAGGCGAAAT CTTCGGCTTC
CTCGGTGCCA ATGGTGCGGG GAAAACCACC GCTATACGCA TCTTCTGCGG ACTTTCGTAC
CCTACTTCAG GCGAGGCTAC CGTAGCGGGC TTCGATGTCT ATCGAGAGCA AGAGCAGATA
AAAAAACACA TCGGTTATAT GAGTCAGAAG TTTTCGCTGT ATGACAACCT CACCGTGCAG
GAAAACATCA CCTTCTACGG AGGTGTCTAT GGCTTGAGTC GCAAGGAAAT CAAAACCCGC
AGTACCGACC TTATCACCAA GCTCGGCTTG GAGGCTGAAG CCAATAAACT CGTAGGTTCG
CTACCACTGG GCTGGAAACA GAAGCTCGCC TTCTCGGTGG CTATCTTTCA CCGTCCCGAA
ATCGTGTTCT TAGACGAGCC CACCGGTGGC GTAGACCCGA TAACGCGCCG ACAGTTCTGG
GATATGATAT ACGAAGCCTC CGCACAGGGC ATCACCGTAT TCGTTACCAC CCACTATATG
GACGAAGCCG AATACTGCCA CCGCATCAGC ATAATGGTAG ACGGCAAAGT AGAAGCAATG
GATACGCCCA CCCACCTTAA ATCACAGTTT AACACTCATT CAATGGACGA GGTGTTCTAC
CAACTCGCCC GTAAAGCAAA ACGTAATGAA TAA
|
|---|
| Protein sequence | MKKNLNTTST PYNGLFPLLG RGGTGVRTAI QCNNLTKQFG DFKAVNNISL TVEKGEIFGF
LGANGAGKTT AIRIFCGLSY PTSGEATVAG FDVYREQEQI KKHIGYMSQK FSLYDNLTVQ
ENITFYGGVY GLSRKEIKTR STDLITKLGL EAEANKLVGS LPLGWKQKLA FSVAIFHRPE
IVFLDEPTGG VDPITRRQFW DMIYEASAQG ITVFVTTHYM DEAEYCHRIS IMVDGKVEAM
DTPTHLKSQF NTHSMDEVFY QLARKAKRNE
|
|---|
| |