| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0113 |
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| Symbol | |
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| ID | 8366515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 134670 |
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| End bp | 135800 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644982532 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_003140239 |
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| Protein GI | 256818960 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.816984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATTC GCCCACCTAT TAATATGAAA CAGCTCATCG CCTTTATACG CAAGGAATTC
TATCACGTAT TCCGCGACCG TCGCACGCTA CTGATACTCT TCGGTATCCC CATAGCGCAG
ATTATCCTTT TCGGTCAAGC CCTCAGCAGC GAAGTCAAGA ATATTGGTAT CGCTGTATTA
GATGAGGCAA ACAACACTTA TAGCCAAGAA ATCACACACC GCTTGCAGGC AAGTCCGTAT
TTTAAGCTGA AAGAGCCTCT GTTCCGTTAC GACCAAGTAG AAGACCAATT CAAGCGTGGC
ACCATAAAAG CGGCGCTCAT CTTCCCTCCC GATTTCGGCA AAGATCTCTA CACCTCCAGT
GGTACCTCGC TACAACTCAT CACCGATGGG AGCGACCCCA ATACGGCTAA AACAGTGCAG
AACTACCTTT CGGCTATGGT AGCGAGCTAT CAGCAAGAGC TGAACCCTGC TGTGCAACTA
CCCTACCAGA TAACCGTTGA AAACCGAATG CTGTACAACG AGGAGCAAAA TGGCTCTATG
AACTTCGTCC CTGGGGTGAT TGCGCTCGTC TTTATGATAG TGAGCACTGC CCTCACCTCG
GTAGCGGTAG TGCGTGAAAA AGAGTTGGGT ACTATGGAAA TCCTTTTGGT ATCGCCTTTC
AAACCTATAA TGATACTCAT TGCTAAAGCC GTTCCTTACC TTATTCTCTC GCTCATCAAC
TTCACCGTGA TACTCCTGCT ATCGGTCTAT ATGCTCGATG TCCCGATACG TGGCAATTTG
CTGTTGCTTT ACGCCGAGAG CACCTTGTTT ATCATCATCT GTTTGTCGTT GGGGCTACTC
ATATCCACCG TTACCGCCTC ACAGCAAACG GCTATGCTCA TCGCTATGAT GGGAATGATG
CTCCCTACGG CTTTCTTTAC CGGCTTTATG TTCCCCATAG AGAATATGCC CCTTGTTTTT
CAAGGAATAT CCAAAGTCTT CCCCTCTAGT TACTACTACG CTATCGTAAA GAAAGTAATG
CTCAAAGGAT TGGATTTCAC TTACGTATGG AAAGAAACGC TGATATTAAT AGCAATGGCG
GTAATTTTCT TAAGCCTTGC AATGAAGAAG TTTAAGATTA GATTACAATA A
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| Protein sequence | MAIRPPINMK QLIAFIRKEF YHVFRDRRTL LILFGIPIAQ IILFGQALSS EVKNIGIAVL
DEANNTYSQE ITHRLQASPY FKLKEPLFRY DQVEDQFKRG TIKAALIFPP DFGKDLYTSS
GTSLQLITDG SDPNTAKTVQ NYLSAMVASY QQELNPAVQL PYQITVENRM LYNEEQNGSM
NFVPGVIALV FMIVSTALTS VAVVREKELG TMEILLVSPF KPIMILIAKA VPYLILSLIN
FTVILLLSVY MLDVPIRGNL LLLYAESTLF IIICLSLGLL ISTVTASQQT AMLIAMMGMM
LPTAFFTGFM FPIENMPLVF QGISKVFPSS YYYAIVKKVM LKGLDFTYVW KETLILIAMA
VIFLSLAMKK FKIRLQ
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