Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0108 |
Symbol | |
ID | 8366510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 128412 |
End bp | 129680 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644982527 |
Product | peptidase M16 domain protein |
Protein accession | YP_003140234 |
Protein GI | 256818955 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCAAT CTCTCATTTT TGAAGAATAC GACCTCTCTA ATGGACTACA CGTGATTCTT CACCGAGATA ACTCAGCTCC TGTGGTTACC ATAGGAGTAA TGTATCACGT AGGTGCCAAA GACGAAGACC CTACCCGCAC TGGCTTTTCC CACTTCTTTG AGCATCTCCT TTTTGAAGGC ACTCAGCATA TAGCACGTGG CAAATGGTTT GATATTGTAT CGGCAAATGG CGGACATAAC AATGCTTTCA CTACGCAGGA TAAAACTTAT TATTATGAAG TCTTCCCGTC TAACAATTTG CAATTAGGCT TGTGGATGGA ATCCGAACGT ATGTTGCACC CTGTTATTAA TGAGATTGGA GTAAGGACTC AAAATTCAGT GGTAAAAGAA GAGAAAAACC AACGTATAGA CAATACACCT TACGGCAGGA TAATGTACCG CTCGGCTATC AATCCGTACC TTTTTAAAAA ACACCCTTAT TCGGGAACAG TAATTGGAAA AGTGGAACAT TTAGACGCTG CAAGCTTAGA GGAGTTTATC GCATTTAAGA AGAAGTTCTA CAACCCTAAC AACGCTGTAC TGGTGGTGGC AGGCGATTTC GATACGGTAC CGACCAAAGA ATGGATAGAA CAATACTTTG CGACCATTCC TAATACGGGT GATGCTATAC AGCGTATCAA AATAGAAGAA GCTCCTATCA CTGAAACTAT TGAGGTAACC GAATACGACC CTAATATACA AATCCCACTG AAACTATATG CCTATCGCAC TCCTGCAATG ACGAACAAAG ATTCGTTTAC TATCGACTTG CTTTCTAACA TTCTCACCGA CGGAAAGAGT GCTCGCCTCT ACAAAAAGAT GATAGACGAG CATCAAACAG CTTTGCAGGT ATTGGCTTTT TCGGACGCTC AAGAAGATTA TGGCGTTTAT ATAATGGGAG CACTCCCTAT GGACGGTGTG AGTTTGGAAA CTTTGGCACA AGAAATGGAC GAAGAAATTA CAAGACTACA AACCGAACTC ATCAGTGAGC GAGAATATGA AAAGTTACAA AACCAGATAG AGGCTAACTT TGTGTCTCAA AATAGCCATA TGGAAGGAAT TGCCCTCTCT TTGGCAGACA ACTATACTTT CTACAAAGAC ACTAACCTTA TTAACAAGGC TATAGACCAC TATCGCGCTA TTACCCGAGA GGATATCAGA GAGGCTGCAC GCAAGTATTT GGACAAAAAC CAACGTTTAG ACCTCAATTA TTTACCTTCA AATCTATAA
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Protein sequence | MAQSLIFEEY DLSNGLHVIL HRDNSAPVVT IGVMYHVGAK DEDPTRTGFS HFFEHLLFEG TQHIARGKWF DIVSANGGHN NAFTTQDKTY YYEVFPSNNL QLGLWMESER MLHPVINEIG VRTQNSVVKE EKNQRIDNTP YGRIMYRSAI NPYLFKKHPY SGTVIGKVEH LDAASLEEFI AFKKKFYNPN NAVLVVAGDF DTVPTKEWIE QYFATIPNTG DAIQRIKIEE APITETIEVT EYDPNIQIPL KLYAYRTPAM TNKDSFTIDL LSNILTDGKS ARLYKKMIDE HQTALQVLAF SDAQEDYGVY IMGALPMDGV SLETLAQEMD EEITRLQTEL ISEREYEKLQ NQIEANFVSQ NSHMEGIALS LADNYTFYKD TNLINKAIDH YRAITREDIR EAARKYLDKN QRLDLNYLPS NL
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