Gene Coch_0103 details

Gene Information

• Locus tag: Coch_0103
• Symbol: rpsP
• ID: 8366505
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 124157
• End bp: 124708
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 644982522
• Product: 30S ribosomal protein S16
• Protein accession: YP_003140229
• Protein GI: 256818950
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0228] Ribosomal protein S16
• TIGRFAM ID: [TIGR00002] ribosomal protein S16

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAGTAA AAATTAGATT ACAACGTCAC GGAAAAAAAG GCAAGCCTTT CTATTGGATT 
GTAGCTGCTA ATTCACGTGC AAAAAGAGAT GGTAAATTCC TTGAAAAATT AGGAACTTAC 
AATCCTGTTA GCAATCCTGC TCAGATTGAA ATAGATGTAG ATGCAGCTGT AAAATGGTTG 
AAAAACGGAG CACAACCTAG CGACACAGCA CGTCGTATTC TTTCTTACAA AGGGGTATTG 
CTTAAATACC ACTTGCTTGG TGGAGTTGCC AAAGGAGCTT TGACCGAAGA ACAAGCAGAG 
GCTAAGTTCA ATGCTTGGAT AGAAGAGAAA GCTAACAAAG TATCTACAAA AGAGCAAAAA 
TTAGCTAAAG AGAAAGCAGA AGCAAAAGCA AAGGCTTTGG ACGCTGAAAA AGAAGCTAAT 
GAGAAACGCA AGAACGCCGC TGTAGCCAAA GCTACCGAAG CAACAGTTGA AGCAACTGAA 
GAGGTTACAG AAGCTACGGA AGCCCCAGAA GCTGAAGCTC CTGCTGAAGA AAATAACGAA 
ACTGAGGCAT AA 

 

Protein sequence

MPVKIRLQRH GKKGKPFYWI VAANSRAKRD GKFLEKLGTY NPVSNPAQIE IDVDAAVKWL 
KNGAQPSDTA RRILSYKGVL LKYHLLGGVA KGALTEEQAE AKFNAWIEEK ANKVSTKEQK 
LAKEKAEAKA KALDAEKEAN EKRKNAAVAK ATEATVEATE EVTEATEAPE AEAPAEENNE 
TEA