| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0090 |
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| Symbol | miaA |
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| ID | 8366492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 111585 |
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| End bp | 112523 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644982509 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_003140216 |
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| Protein GI | 256818937 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.376959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCATA AAAAAATACT TTTGAGTGTG GTAGGACCTA CTGCTATTGG AAAAACACGA
ATGGCTATAG CCTTAGCACA ACACTTCGGT ACTGAAATCA TCTCTTGCGA CTCACGACAG
TTTTTTAAGG AGCTTTCTAT AGGCACAGCG GTTCCTTCGC CCTATGAATT GGCTCAGGCA
AAGCACCATT TCATTCAGCA TAAATCTATT TTTGAGCCTT ATTCGGTAGG CGATTTTGAG
CGCGATGCTA TTAGCTTGCT CAACACACTT TTTAGAACTC ACGATGTGGT AGTAATGGTA
GGAGGAAGTG GGCTTTATGC TAATGCAGTG CTCAGAGGGT TAGATGATTT TCCTGAAACC
GATGAACAGA TAAGAAAAGA GCTGAATGCG CAGTATAAAG CAGAAGGCAT TGTTTTTTTG
CAACAAAAGC TAAAAACTTT AGACCCTGTG CAATACGAGA AAATAGATAC AAATAATCCG
CAACGAATGA TACGCGCCTT AGAAGTGTGT ATGGTAGCAG GGAAGCCTTA TTCGTCTTTT
TTAAACAAAA AAGAAACGGT GAGAGACTTT GAGAGCATAC AAGTAGGACT TACGGCAGAA
CGAGAGGTGC TTTACAATCG CATTGATGAG CGAGTAGAGC AAATGCTCGA AGGTGGGTTG
CTTATAGAAG CACAAGATAT GTTTCCGCAC AAGGAACTCA ATGCTTTGCA GACAGTAGGC
TACAAGGAGT TATTTGCTTT TTTTGAAGGG AAGACCTCGT TTGGCTTTGC GATAGAGGAA
ATTAAGAAGA ACACCCGTCG ATTTGCCAAG CGACAATTTA CGTGGTTTCA TAAAGATAGT
TCTATACATT GGTTTGATTA TAGGACAACG GTGGAGGAAG TTCTTCAGAA AACCACAATG
CAGAAATGCC AATTATTGAA GGTAAAAGAT AAAAGGTAA
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| Protein sequence | MKHKKILLSV VGPTAIGKTR MAIALAQHFG TEIISCDSRQ FFKELSIGTA VPSPYELAQA
KHHFIQHKSI FEPYSVGDFE RDAISLLNTL FRTHDVVVMV GGSGLYANAV LRGLDDFPET
DEQIRKELNA QYKAEGIVFL QQKLKTLDPV QYEKIDTNNP QRMIRALEVC MVAGKPYSSF
LNKKETVRDF ESIQVGLTAE REVLYNRIDE RVEQMLEGGL LIEAQDMFPH KELNALQTVG
YKELFAFFEG KTSFGFAIEE IKKNTRRFAK RQFTWFHKDS SIHWFDYRTT VEEVLQKTTM
QKCQLLKVKD KR
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