Gene Coch_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0088 
SymbolmraY 
ID8366490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp109349 
End bp110584 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content41% 
IMG OID644982507 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_003140214 
Protein GI256818935 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.930587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATATT ATTTATTAGA AAACCTTGAA AAATATTACG ACTTTCCAGG GTCGGGGCTT 
TATAAATACT TATCGTTTCG CGCAGGCTTG GCTTTAATGC TTTCCTTGCT TATTTCTACC
ATCTATGGGA AGCGTATTAT TCGCCTCCTA CAACGCAAAC AGATAGGCGA GACGGTGCGT
GACTTAGGGC TTACGGGGCA GAATGAGAAA GCAGGCACTC CTACTATGGG GGGGATTATC
ATTATTCTTG CCACGCTTAT TCCTGTACTG CTGTTGGCTA AGTTAGATAA CGTATATACC
CTATTGTTAC TCATCACTAC TGTGTGGATG GGAGCTATTG GCTTTGTCGA TGATTATATC
AAGACTTTCC GCAAGAATAA AGACGGACTG AAAGGACGTT TCAAAATATT AGGACAAATA
GGCTTAGGAA TTATCGTAGG AGCGACGCTC TATTTCAATG ATAATGTAAC TATTAAGAGT
GAGAAAACAG GTATTGGGCG AACACGTACT GAAGTAGTAG CAGAAACAGC CACAGAGAAT
TTTGTTCCAG AAGTGAAATC GACGAAAACT ACTATTCCGT TTGTGAAGAA TAACGAGTTT
GACTATGCTG ACCTCATTGC GTGGGCAGGA GATAATTATC ATCATTATGT GTGGCTGGTG
TTTATTCCCA TTGTGATTCT TATTGTTACA GCGGTTTCTA ACGGTGCGAA CCTTACTGAT
GGTATAGACG GATTGGCAGC GGGAAGCTCG GCTATTATAG TCCTAACATT AGGGCTATTT
GCGTGGATTT CGGGTAACAT TATCTTCTCG GAATACTTAA ACATTATGTA TATCCCAAGA
GTAGGGGAGA TGACGGTATT CATAGCTGCT TTTGCAGGAG CTTTGGTGGG CTTTTTGTGG
TATAATACCT ATCCTGCCCA AGTGTTTATG GGCGATACAG GAAGTTTGAC CATAGGCGGG
ATTATAGCTG TAATAGCCAT AGCAGTACGC AAAGAACTCT TGTTGCCTGT GCTCTGTGGT
ATCTTCCTCA TTGAAAACTT ATCGGTGATA TTGCAAGTGT TTTACTTTAA ATATACGAAG
AAAAAGTATG GTGAAGGTAG ACGTATCTTC TTGATGTCGC CTTTACACCA CCATTACCAA
AAGAAGGGCT ATCACGAGAG TAAAATAGTG ATGCGCTTTC TTATTGTAGG GATTTTTTTA
GCGGTGATTA GCATTGTAAC GCTGAAATTG AGATAA
 
Protein sequence
MLYYLLENLE KYYDFPGSGL YKYLSFRAGL ALMLSLLIST IYGKRIIRLL QRKQIGETVR 
DLGLTGQNEK AGTPTMGGII IILATLIPVL LLAKLDNVYT LLLLITTVWM GAIGFVDDYI
KTFRKNKDGL KGRFKILGQI GLGIIVGATL YFNDNVTIKS EKTGIGRTRT EVVAETATEN
FVPEVKSTKT TIPFVKNNEF DYADLIAWAG DNYHHYVWLV FIPIVILIVT AVSNGANLTD
GIDGLAAGSS AIIVLTLGLF AWISGNIIFS EYLNIMYIPR VGEMTVFIAA FAGALVGFLW
YNTYPAQVFM GDTGSLTIGG IIAVIAIAVR KELLLPVLCG IFLIENLSVI LQVFYFKYTK
KKYGEGRRIF LMSPLHHHYQ KKGYHESKIV MRFLIVGIFL AVISIVTLKL R