Gene Coch_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0085 
Symbol 
ID8366487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp106076 
End bp106738 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content42% 
IMG OID644982504 
Producthypothetical protein 
Protein accessionYP_003140211 
Protein GI256818932 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0719573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACCT TAGAATATAA CACCGAACGC CCTCACTTAA TCATCCCCGA ATACGGGCGA 
CACATTCAAA AAATGATAGA AAAAGCGGTA CTCCTTAAAG ACCGCGATAC ACGTAATAAA 
ACGGCTCGAA GTATCGTCGC CGTAATGGGA AACTTATTCC CTCACTTGCG CGACGTCCCT 
GATTTCCAAC ATAAACTTTG GGACCAGCTC TTTATAATGT CCAATTTTCA GTTAGACGTC 
GATTCCCCTT ATGAAAAACC CACGCCTTCC ACACTTCATA AACACCCCGA AAGACTTAGA 
TACCCTCAAG CACATCCCCG CTACCGCTTC TACGGCAACG TAATTATTCG TATGATAAAC 
ACTTGCGTAA ATTGGGAAAA AGGCGACCTA CGTGAAGCTT TAGAGTATTC TATCGCTAAC 
CATATGAAGA AATGCTTCCT CACTTGGAAT AAGGAAAGCG TAGACGATAG TGTAGTTTTT 
GAACATCTAT ACGAACTGAG TAACGGGCAA ATTGATTTGA GAAAGGCTAA CGAAGACCTT 
ACTAATAGTC GTGACCTTAT CCGCACGAAG CAAAATCTAA CTAAACGCAC TCCTCAACCG 
CAACCTCAGC AAGCTAAAAG AATATTCTCA ACCAATAAAA AAAATAACAA TGGGCGTTTT 
TAA
 
Protein sequence
MTTLEYNTER PHLIIPEYGR HIQKMIEKAV LLKDRDTRNK TARSIVAVMG NLFPHLRDVP 
DFQHKLWDQL FIMSNFQLDV DSPYEKPTPS TLHKHPERLR YPQAHPRYRF YGNVIIRMIN 
TCVNWEKGDL REALEYSIAN HMKKCFLTWN KESVDDSVVF EHLYELSNGQ IDLRKANEDL 
TNSRDLIRTK QNLTKRTPQP QPQQAKRIFS TNKKNNNGRF