Gene Coch_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0081 
Symbol 
ID8366483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp103383 
End bp104075 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content42% 
IMG OID644982500 
Productpeptidase E 
Protein accessionYP_003140207 
Protein GI256818928 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3340] Peptidase E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA TATTATTAGC GAGTACTTCT ACTGTATATG GGGGTACTTA TCTTTCTTAT 
TTACAAGATG AATTGATTGA TTTCTTTACA GGAATTGACG AAATATTGTT TGTGCCTTAT 
GCACGCCCCA GTGGTATTAC GCACGATGAA TATACTCAGA TTGCGCAACA GTTTTTCAAT 
AGAGTAGGGA AGAGGATAGT GGGCTTACAC ACATTCGCTG ACCCTAAAAA GGCTATTAGG 
CAGGCAAAAG CGATTTTTAC AGGCGGAGGT AATACCTTCG TGCTGGTGAA TCAGTTGTAC 
GGATTGGAAG TGATGGACGT ATTGCGTGAA GCAGTAGAAA ATGGGACGCT TTATATGGGA 
ACAAGCGCAG GGAGCAATAT CGCTGGACAG ACAATGCAGA CTACTAATGA TATGCCTATT 
GTTTACCCGC CTTCGTTTAA AACCTTAGGG CTTGTGCCTT TTAATATCAA TCCTCATTAC 
CTTGACCCAG ACCCCAAAAG TAAACACAAG GGAGAAACTC GCGAAACGCG AATTAAGGAA 
TTCCACGTTT TTAACGATAC TCCTGTGATA GGTTTGCGCG AAGGTAGTTG GCTACGTATG 
GAAGATGAGA AGGTTAGCCT TAAAGGCGAT TTGACGGCTA GAATCTTCCT AAAAGGGCAA 
GAACCTTACG AAAGTACGGA AATTTTGTTG TAG
 
Protein sequence
MKRILLASTS TVYGGTYLSY LQDELIDFFT GIDEILFVPY ARPSGITHDE YTQIAQQFFN 
RVGKRIVGLH TFADPKKAIR QAKAIFTGGG NTFVLVNQLY GLEVMDVLRE AVENGTLYMG 
TSAGSNIAGQ TMQTTNDMPI VYPPSFKTLG LVPFNINPHY LDPDPKSKHK GETRETRIKE 
FHVFNDTPVI GLREGSWLRM EDEKVSLKGD LTARIFLKGQ EPYESTEILL