| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0078 |
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| Symbol | |
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| ID | 8366480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 100957 |
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| End bp | 102108 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644982497 |
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| Product | oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_003140204 |
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| Protein GI | 256818925 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTATAGCT TATACATTCA TATTCCCTTT TGTAGGCGTG CTTGTTATTA TTGTGATTTC
CATTTTTCGA CTACTCTGAA AAGAAAAGGA GAAATGGTAG ATGCCCTTTG TGAGGAACTC
ATTTTCCGCA AAGGGGAAGC CGTAGGTAGT GAGTTACAGA CTATCTACTT AGGAGGAGGG
ACGCCCAGTA TCCTTTCGTA TGAGGAATTA CAACAACTTT TTCGCACCAT CTTCACACAT
TACAAGGTAA ATACCACAGC TGAAATTACC TTAGAAGCCA ATCCTGATGA CTTTTTTAGA
GCTACTTCTC CCGAGCAATT TTTGGAACAA TTACGCTCTT TGGGTATCAA TAGGCTCAGT
TTAGGAGTGC AGTCGTTTTT TGAAGAGGAC TTGCGATTGA TGAACAGAGT GCATACGGTA
AGCCAAGTAG AAACTTTATT ACAAATAGCT CCACAGTATT TTAATAATAT CACGATTGAT
TTGATTTACG GCATTCCCCG AATGAGTGAG GAACGCTGGC AGGAGAATAT CAATAAGGCA
CTGTCTTTCG ATATTCCGCA TATCTCAGCC TATGCGCTTA CGGTAGAAGA AAAAACAGCT
TTGTACAAGT TTATTGCTAC GGGGAAAATC GCGCCAATAA GCGATGAGCA GGCTTACACT
CACTTTCAAA TGTTGATAGA TACTCTGGAA GCAGAGGGGT TTATACAATA CGAATTTTCA
AACTTTGGCA AAGAAGGGTA TTTTAGCAGG AATAACACGG CTTATTGGTT TGGCAAGCTC
TATATGGGAA TAGGTCCTTC AGCCCACAGT TTTAACGGGA AGGAGCGTAG TTGGAATATT
GCTCATAACA TTAAGTATAT ACAACAAATA CAGCAAGGGA TTTTGCCACA GGAAAAAGAA
GAACTTACCC TTAATAACCG ATATAACGAA CTCATCATCA CGCGTATACG CACGATGGTA
GGGATTGATT TAGAAGAAGT GAGAACAGTA TTTGGGGAAG GTTACCGCCA ATATTTGTTA
CAACAAGCAC AGAAGTACCT TGCCGATGAG CTTTTAGTTA TAGAGGAAAA CCATCTGAAA
GTAACGCGCA AAGGCAGATT CCTCTCAGAT GGTATAGCTT CGGATTTATT TAGGGTGGAT
GACCTCACTT AG
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| Protein sequence | MYSLYIHIPF CRRACYYCDF HFSTTLKRKG EMVDALCEEL IFRKGEAVGS ELQTIYLGGG
TPSILSYEEL QQLFRTIFTH YKVNTTAEIT LEANPDDFFR ATSPEQFLEQ LRSLGINRLS
LGVQSFFEED LRLMNRVHTV SQVETLLQIA PQYFNNITID LIYGIPRMSE ERWQENINKA
LSFDIPHISA YALTVEEKTA LYKFIATGKI APISDEQAYT HFQMLIDTLE AEGFIQYEFS
NFGKEGYFSR NNTAYWFGKL YMGIGPSAHS FNGKERSWNI AHNIKYIQQI QQGILPQEKE
ELTLNNRYNE LIITRIRTMV GIDLEEVRTV FGEGYRQYLL QQAQKYLADE LLVIEENHLK
VTRKGRFLSD GIASDLFRVD DLT
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