Gene Coch_0068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0068 
Symbol 
ID8366470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp90302 
End bp91021 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content39% 
IMG OID644982487 
Productconserved hypothetical protein, secreted 
Protein accessionYP_003140194 
Protein GI256818915 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.714566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATA TGAAAAGAAT AATTACATTT ATCCTTGTAA CATTAGTTGT AGGCATAGGA 
TACAGCCAAA AGAAGACAGA AAAAAGCAAA GAAGTTATCA CCGAAGACAG AAAAGTAGCG 
AATTATGACG CCATAGAAGT TTCGGGAGCT TATAACCTTG TGCTTACAGA AGGAGAGGTA 
GGCAAAATAA AAGTGAAAGG ACAGAAAGAG GTACTTTCGT ATTTAGAGAC CAAAGTCTTC 
AACAATGTGC TTTATATAAG CATTGATAGG AAATACTCAC TCAAAACCTC TATTACTGTG 
TACGTACCTA TCGACACTCG TTTAAAGAGA GTAATAGGGA AAGGGGCTGT GGATATATCT 
ACAGAAAAGA AGTTGCAAGT GGGTTCTTTG TTAGTAAAAT TAGAGGGTAG TGGAGACCTT 
GAAGCATCGA TAACGGCTAC TTCACTTGAT TTACAAGTGG CTGGAGCAGG AGGTATAGAC 
ATTGCAGGAG AAACCAAAAA CCTAAGTGTA TACGTGAAAG GTGCTGGCGA TGTAGATGCT 
GATGAGCTTA AAGCTGAAAA AGCTACTTTG CGCATAGCAG GAGCAGGAGG CATATCGGCT 
TATGTAACGC AAGAGGTAGA TGCTTCTATC GCAGGAGCAG GAGGCATTAC TGTGAAAGGA 
AATCCGCCTG TATTTAAGAA AAGTGTGAAA GGGATAGGGC GTATTAAAAT AGAAGAATAA
 
Protein sequence
MKYMKRIITF ILVTLVVGIG YSQKKTEKSK EVITEDRKVA NYDAIEVSGA YNLVLTEGEV 
GKIKVKGQKE VLSYLETKVF NNVLYISIDR KYSLKTSITV YVPIDTRLKR VIGKGAVDIS 
TEKKLQVGSL LVKLEGSGDL EASITATSLD LQVAGAGGID IAGETKNLSV YVKGAGDVDA 
DELKAEKATL RIAGAGGISA YVTQEVDASI AGAGGITVKG NPPVFKKSVK GIGRIKIEE