Gene Coch_0064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0064 
Symbol 
ID8366466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp85616 
End bp86560 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content37% 
IMG OID644982483 
ProductGSCFA domain protein 
Protein accessionYP_003140190 
Protein GI256818911 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00472332 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTA GAACTATTGT GCCTATACCC AAGACTACTA AAAGCATTAC TTATCACTCG 
CAGATACTGA GTATAGGTTC TTGCTTTGCT GTGAATATGG CACAAAAGTT TAGTTATTAT
AAAATTCCTG TTACGGTAAA CCCTTTTGGG ATACTCTTTC ACCCCTTAGC TATTGAAAAT
GTGCTTAACA GAGCAATAGA ACACACTCCT TATGAGGCTG AAGATTTCTT TTTGCACAAT
GAACTTTGGC ACAGTTTCGA CTTTCATTCG GATATGAGCA AACCGAATTT AGAGGAAGCT
GTTCATCTTG CCAATATACA ACAAACAGCA CTTTATAACG CACTACAAAA AGCCGATTTC
TGTTTTATCA CTCTTGGTAC AGCTTGGGTA TACATCTATA ACAGTACTGA TAAGATAGTG
GCAAATTGTC ATAAAGTGCC TCAACAACAC TTCTCAAAAC GACTATTATC AGTAGAAGAG
ATAGGGGAGA GCCTTACCCA TATTATAGCA CTGTTGAAGA AGGTGAATAA GGACTTGCAA
TGTGTTTTCA CTATTTCGCC TGTACGACAC TTGAAAGATG GTTTTTTAGA AAACCAAGTG
AGCAAAGCAC ATTTGCTGGT AGCACTTTAT TCGGTACTTT CATCAGAGGA GTGCACTTAT
TTTCCAGCCT ATGAATTGCT TTTAGATGAA CTTCGCGATT ACCGCTTTTA CGCTAATGAT
ATGGTACACC CATCGGAAAT AGCCATAGAC TATATTTGGG AACGCTTAGT AGAAACCTAT
ATAGATAAGG CTACTCAGGC AGATATGAAA CAAGTAGATG CCATACAGAA AGGGTTGCAA
CATCGTCCGT TTAACCCTAA AACAGAGAGT TATCGGCAGT TTCAAATACA ATTACGACAG
AAAATAGAGG TTTTTAAAAA GAAATACCCT CATATTGAGA TATAA
 
Protein sequence
MEFRTIVPIP KTTKSITYHS QILSIGSCFA VNMAQKFSYY KIPVTVNPFG ILFHPLAIEN 
VLNRAIEHTP YEAEDFFLHN ELWHSFDFHS DMSKPNLEEA VHLANIQQTA LYNALQKADF
CFITLGTAWV YIYNSTDKIV ANCHKVPQQH FSKRLLSVEE IGESLTHIIA LLKKVNKDLQ
CVFTISPVRH LKDGFLENQV SKAHLLVALY SVLSSEECTY FPAYELLLDE LRDYRFYAND
MVHPSEIAID YIWERLVETY IDKATQADMK QVDAIQKGLQ HRPFNPKTES YRQFQIQLRQ
KIEVFKKKYP HIEI