Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0064 |
Symbol | |
ID | 8366466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 85616 |
End bp | 86560 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644982483 |
Product | GSCFA domain protein |
Protein accession | YP_003140190 |
Protein GI | 256818911 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00472332 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTA GAACTATTGT GCCTATACCC AAGACTACTA AAAGCATTAC TTATCACTCG CAGATACTGA GTATAGGTTC TTGCTTTGCT GTGAATATGG CACAAAAGTT TAGTTATTAT AAAATTCCTG TTACGGTAAA CCCTTTTGGG ATACTCTTTC ACCCCTTAGC TATTGAAAAT GTGCTTAACA GAGCAATAGA ACACACTCCT TATGAGGCTG AAGATTTCTT TTTGCACAAT GAACTTTGGC ACAGTTTCGA CTTTCATTCG GATATGAGCA AACCGAATTT AGAGGAAGCT GTTCATCTTG CCAATATACA ACAAACAGCA CTTTATAACG CACTACAAAA AGCCGATTTC TGTTTTATCA CTCTTGGTAC AGCTTGGGTA TACATCTATA ACAGTACTGA TAAGATAGTG GCAAATTGTC ATAAAGTGCC TCAACAACAC TTCTCAAAAC GACTATTATC AGTAGAAGAG ATAGGGGAGA GCCTTACCCA TATTATAGCA CTGTTGAAGA AGGTGAATAA GGACTTGCAA TGTGTTTTCA CTATTTCGCC TGTACGACAC TTGAAAGATG GTTTTTTAGA AAACCAAGTG AGCAAAGCAC ATTTGCTGGT AGCACTTTAT TCGGTACTTT CATCAGAGGA GTGCACTTAT TTTCCAGCCT ATGAATTGCT TTTAGATGAA CTTCGCGATT ACCGCTTTTA CGCTAATGAT ATGGTACACC CATCGGAAAT AGCCATAGAC TATATTTGGG AACGCTTAGT AGAAACCTAT ATAGATAAGG CTACTCAGGC AGATATGAAA CAAGTAGATG CCATACAGAA AGGGTTGCAA CATCGTCCGT TTAACCCTAA AACAGAGAGT TATCGGCAGT TTCAAATACA ATTACGACAG AAAATAGAGG TTTTTAAAAA GAAATACCCT CATATTGAGA TATAA
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Protein sequence | MEFRTIVPIP KTTKSITYHS QILSIGSCFA VNMAQKFSYY KIPVTVNPFG ILFHPLAIEN VLNRAIEHTP YEAEDFFLHN ELWHSFDFHS DMSKPNLEEA VHLANIQQTA LYNALQKADF CFITLGTAWV YIYNSTDKIV ANCHKVPQQH FSKRLLSVEE IGESLTHIIA LLKKVNKDLQ CVFTISPVRH LKDGFLENQV SKAHLLVALY SVLSSEECTY FPAYELLLDE LRDYRFYAND MVHPSEIAID YIWERLVETY IDKATQADMK QVDAIQKGLQ HRPFNPKTES YRQFQIQLRQ KIEVFKKKYP HIEI
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