| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0063 |
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| Symbol | |
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| ID | 8366465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 83219 |
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| End bp | 85558 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644982482 |
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| Product | Beta-N-acetylhexosaminidase |
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| Protein accession | YP_003140189 |
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| Protein GI | 256818910 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0268197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAA AATTAACTTC CGCACTTTTG TTATTGATAA CGATTATTTC GTGTAAATCA
ACTACAAACA ATCAAGGAGA GAGTACTGCT AATTATGAGG TAATTCCACT ACCCGAAATG
ATTACCACTC CCCAAGCTGA TGCCGATAAA CCTTTCGTGC TTACGGCTGA TACCAAAATC
ACCTATCCAG AAGGTGATGC TTCTTTACAG CAGTACGCTG GATTCTTGCA AGAGTATATC
AAAAAACAAG CAGGAATTGA AGTGAATATC ACTCCTAACC AAAACAATGA GACCAACACT
ATTGCCTTGT TGCAAAATTA CCAAAACAAC AACAAAGAGG CTTACCAAGT AGTGGTGAAT
GCCAAGAACA TTACTGTAAA TGGAGCTTCT AAAGCGGGTA CTTTCTATGG AGTACAACTC
TTGAGAAAAT CCATTCCGGT ACAAAAAGTA GGCAAAGTCA TCTTCCCTGC CAAAGAAATA
ACCGATAAAC CCTATTTCGC TTATCGTGGT GCACATTTAG ATAGTGCCCG TCACTTTTTT
AATGCCGACT CTGTGCGCAT TTATATCGAT ATGTTAGCAC TCCACAATAT CAATAAATTC
CATTGGCATC TCACCGATGA TCAAGGTTGG CGTTTTGAAT CTAAAAAATA CCCCGAACTT
ACTGTGGTAG GAAGCACTCG TAGCCAAACT ATGGTAAACA AACAGTGGGA CACCTTCGAT
GGTAAACCTC ACGGAGGCTT CTATACTCAG CAAGAAATGA AAGACATTGT AAAATATGCC
GCCGACCGCA ATATTACCGT TATTCCTGAG ATAGACCTCC CAGGACATAT GGTTGCTGCT
TTGGCTACTT ATCCACAATT AGGCTGTACA GGAGGCCCTT ATAAAGTAAG AGAAACTTGG
GGCATAGCCG AAGATGTACT TTGTGCTGGC AACCCCGAAA CTTATGATTT CATTAAAAAT
ATATTAGAAG AAGTAACTGA AGTATTCCCT TCAGAATATA TCCATATAGG AGGTGACGAA
TGTCCTAAAG ATAGCTGGAA GAAATGCCCT AAATGCCAAG CTAAGATAAA AGAGTTAGGT
ATTAAAGGTG ATGCTAAACA CACAGCCGAA GAATACTTAC AAAGTCACAT AATTACATTC
GCTGAAGATG TATTAGCTAA AAAAGGTCGC AAAATCATTG GTTGGGACGA AATCCTTGAA
GGAGGTTTAG CTCCTAATGC TACTGTAATG TCTTGGAGAG GTATCGGGGG CGCTATAGAA
GCAGCCAAGT CTAACCACGA TGCTATTATG ACCCCTGTTT CTTATTGCTA CTTCGACTAT
TATCAAACAG ATAAAACCGA TAAAGAACCT CTTGCTATTG GTGGTTATGT ACCGGTAGAA
CGTGTTTACT CTTTCAATCC TTACCCCGAT GCGCTTAATA AAGAACAACA AAAACACATC
TTAGGAGTAC AAGCCAATGT TTGGACAGAG TATATCAAGA CTTTCAAACA CGTACAATAT
ATGGTATTGC CTCGTTTTGC AGCCTTAGCC GAAGTACAAT GGGAAGACCC TGCAAAACCT
AAAGACTACA ATCAGTTTTT ACAACGCTTA ATGCGCTTAC TTCCTATCTA CCAGTTAGAA
GGTTATAACT ATGCTAAACA CATATTCGAT CTTCGTGCCG AAGTAAAACC TGAGGTAGGT
GATATACAAG TAACACTCTC TTGTTTACAA GACACACCTA TCTATTACAC TACCGATGGG
AGTGAACCTA CTAAGAGTTC TAACGTGTAT AAAGAACCTT TAAAACTCAC TCAAGATACA
CATCTAAAAG CTAAAGTATT CGGTCAGGAA ACCGAAAGTA GCTTCGAACA ACAGTTCCTT
TTCAACAAAG CAACCGTACG CCCTATTGAG TTCCTCAGTA AACCTAGTTA CAACTATACT
TTTGGGGGCG CTATTACCTT AGTTGATGGT AGAAAAGGGG GTACTAATTC ACGCTCTGGA
GAATGGTTAG GTTTTAGTGA AGCACCTTGT GAAGTGGTGA TTACCCTAAA AGAAAATACT
CCTGTAAAAG AAGTGCGCTT CAATGCTCTT ATTGAAACAG GTGATTGGAT TTACCCTCCA
ACCAGCTTTG AAGTATCGGG GTCTAAGGAC GGTAAAAGTT ATGATTTACT CGCTAAAGAA
AACTATGCGC TTCCTAAGGA ACCTCTCAAA GAAATAAAAA CTTACTCTCT TTCTTTCCCT
GAAAAAGAAG TAACCTATCT AAAAGTGAAG ATAAATGGAG TAAACAAAAT TCCTTCTTTC
CATCAAGGAG CAGCTGGTAA ACCTGGTTTC CTCTTCATCG ATGAAATTCA AGTATTGTAA
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| Protein sequence | MKIKLTSALL LLITIISCKS TTNNQGESTA NYEVIPLPEM ITTPQADADK PFVLTADTKI
TYPEGDASLQ QYAGFLQEYI KKQAGIEVNI TPNQNNETNT IALLQNYQNN NKEAYQVVVN
AKNITVNGAS KAGTFYGVQL LRKSIPVQKV GKVIFPAKEI TDKPYFAYRG AHLDSARHFF
NADSVRIYID MLALHNINKF HWHLTDDQGW RFESKKYPEL TVVGSTRSQT MVNKQWDTFD
GKPHGGFYTQ QEMKDIVKYA ADRNITVIPE IDLPGHMVAA LATYPQLGCT GGPYKVRETW
GIAEDVLCAG NPETYDFIKN ILEEVTEVFP SEYIHIGGDE CPKDSWKKCP KCQAKIKELG
IKGDAKHTAE EYLQSHIITF AEDVLAKKGR KIIGWDEILE GGLAPNATVM SWRGIGGAIE
AAKSNHDAIM TPVSYCYFDY YQTDKTDKEP LAIGGYVPVE RVYSFNPYPD ALNKEQQKHI
LGVQANVWTE YIKTFKHVQY MVLPRFAALA EVQWEDPAKP KDYNQFLQRL MRLLPIYQLE
GYNYAKHIFD LRAEVKPEVG DIQVTLSCLQ DTPIYYTTDG SEPTKSSNVY KEPLKLTQDT
HLKAKVFGQE TESSFEQQFL FNKATVRPIE FLSKPSYNYT FGGAITLVDG RKGGTNSRSG
EWLGFSEAPC EVVITLKENT PVKEVRFNAL IETGDWIYPP TSFEVSGSKD GKSYDLLAKE
NYALPKEPLK EIKTYSLSFP EKEVTYLKVK INGVNKIPSF HQGAAGKPGF LFIDEIQVL
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