| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0062 |
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| Symbol | |
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| ID | 8366464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 81664 |
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| End bp | 82662 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644982481 |
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| Product | pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit |
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| Protein accession | YP_003140188 |
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| Protein GI | 256818909 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000533837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TTGATAAAGA AGTGTACCTA AAATGGTACG AGGATATGCT TTTTTGGAGG
AAATTTGAAG ATAAACTCGC TGCAGTTTAT ATTCAACAAA AAGTAAGGGG GTTCTTGCAC
CTATACAACG GTCAAGAAGC GGTGGCTGCA GGTTGTTTGC ACGCTATTGA CCCTACCAAA
GACAAAATGA TTACTTCTTA CCGTTGCCAC GTACATCCCA TAGGTTTGGG CGTAGACCCT
AAACGTATTA TGGCTGAATT GTACGGTAAA GGTACAGGTA CTTCTCTTGG ATTAGGAGGC
TCTATGCACA TCTTTTCGAA AGAACACCAC TTCTATGGTG GTCACGGTAT CGTAGGAGGA
CAGATTGCAT TGGGTGCTGG TTTGGCTTTT GCCGATAAGT ACTTCAATAG AGAGGCGGTT
ACACTTACCT TTATGGGTGA TGGTGCGGTG CGCCAAGGAG CTTTTCACGA AACAATGAAT
ATGGCTATGT TGTGGAAATT GCCTGTGGTT TTTATTGTAG AAAACAATCA CTACGCAATG
GGTACATCGG TAGAAAGAAC TGCTAACCAC GTGGATATTT GGAAACTCGG GTTGGGTTAC
CAAATGCCTT GCCAACCCGT AGATGGTATG CACCCTGAAA CAGTAGCCGA AGCGGTGTAT
GAAGCAGTAG AACGCGCTCG CCGTGGAGAA GGACCAACTT TGCTTGACAT TCGTACTTAT
CGTTATCGTG GACACTCAAT GTCGGATGCG CAACACTACC GTACTAAAGA AGAGGTGGAA
GAGTACAAAA AACAAGACCC AATCACCAAT GTACTTGCGG TTATCAAAGA GAAGAAATAT
GCTACCGATG CTGAGTTAGA AGCTATCGAC GAACGTGTGA AAGAACGTGT GGCTGAGTGT
GAGAAATTTG CAGAAGAATC ACCTTATCCA GAAACACATA TTATGTATGA TGTGGTTTAC
GACCAAGAAA ATTACCCTTT CTTGCCCAGT AGATTATAA
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| Protein sequence | MKKFDKEVYL KWYEDMLFWR KFEDKLAAVY IQQKVRGFLH LYNGQEAVAA GCLHAIDPTK
DKMITSYRCH VHPIGLGVDP KRIMAELYGK GTGTSLGLGG SMHIFSKEHH FYGGHGIVGG
QIALGAGLAF ADKYFNREAV TLTFMGDGAV RQGAFHETMN MAMLWKLPVV FIVENNHYAM
GTSVERTANH VDIWKLGLGY QMPCQPVDGM HPETVAEAVY EAVERARRGE GPTLLDIRTY
RYRGHSMSDA QHYRTKEEVE EYKKQDPITN VLAVIKEKKY ATDAELEAID ERVKERVAEC
EKFAEESPYP ETHIMYDVVY DQENYPFLPS RL
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