Gene Coch_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0037 
Symbol 
ID8366439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp53661 
End bp54404 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content40% 
IMG OID644982457 
ProductNADH:ubiquinone oxidoreductase, subunit E 
Protein accessionYP_003140164 
Protein GI256818885 
COG category[C] Energy production and conversion 
COG ID[COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE 
TIGRFAM ID[TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGAAT ATTTAACACT GATTTTTAAA TCGGTATTCG TAGAGAATAT GATTTTCGCT 
ACCTTCTTGG GTATGTGTTC GTACTTGGCT GTGTCTAAAA AAGTATCTAC TGCCATAGGC
TTAGGAGCTG CCGTTATTTT TGTACAGACT CTTACCGTAC CTATGAACTA CTTGTTGAAC
CAGTATATCC TCAAAGAAGG TGCTTTAGCT TGGTTAGGTC CAGAGTATGC TAATTATGAT
TTGAGCTTCC TTACCTATAT CTTATTCATT GCCACTGTAG CTACGATGGT GCAGTTGGTA
GAGATTATTG TAGAGAAATT TTCTCCATCG TTATATAACT CGTTGGGTAT TTTCTTGCCT
TTGATAGCCG TAAACTGTGC TATCTTGGGA GGGTCACTCT TTATGCAATC ACGTGAGGAA
ACTATTCACT CTTTTGGTCT TTCAGTAGCC TACGGGTTCA GTTCAGGATT GGGATGGGCT
ATTGCTATCT TAGCGTTAGC AGCTATCCGT GAGAAAATAC GTTATTCACA CGTACCTGCA
CCCTTGCGTG GCTTGGGTAT CACCTTTATC ACTACAGGGC TTATGGCTAT CGGCTTTATG
AGTTTTGGTG GTATGCTTAC AGGTGGTAGC AGCAAAAAGG AAGCTAAAGA AGCTCCTAAA
CAAGAGACTA CTATCCAACA AGAAGTTAAA ACTGATAAAT TAGCTCATAA CACAAAAGAT
TTAAGCAATG ATATTAGCAA GTGA
 
Protein sequence
MLEYLTLIFK SVFVENMIFA TFLGMCSYLA VSKKVSTAIG LGAAVIFVQT LTVPMNYLLN 
QYILKEGALA WLGPEYANYD LSFLTYILFI ATVATMVQLV EIIVEKFSPS LYNSLGIFLP
LIAVNCAILG GSLFMQSREE TIHSFGLSVA YGFSSGLGWA IAILALAAIR EKIRYSHVPA
PLRGLGITFI TTGLMAIGFM SFGGMLTGGS SKKEAKEAPK QETTIQQEVK TDKLAHNTKD
LSNDISK