Gene Coch_0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0035 
Symbol 
ID8366436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp50986 
End bp51753 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content41% 
IMG OID644982454 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003140162 
Protein GI256818883 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATA GATTGCAAGG TTCGTTGTAT ACGAAAATAG ATAAAAAACT GGCTGTTACT 
ACTTTTGGAC ATCCTAATGC GAACTCTTTC CCTTTGGAGT TGCTAAACAG ACTTACCAAA
GAAATTGATG CGCTTTCTGA AAATGAAGAA GTAAGCATTA TACTTCTCAA GAGTGAAGGA
GATAGAGCTT TTTGTGCAGG AGCTTCTTTT GACGAGCTCT TAGCCGTTAG CAATGAAGAA
GAAGGAAAAC GTTTCTTTGA GGGCTTTGCG CATCTTTTTT TGGCGATGCG TCGCTGTAAA
AAACTTATTA TTGGGCGCGC TCAAGGCAAG GCTGTTGGCG GAGGAGTGGG CTTACTCGCT
ACCTTAGACT ATGTGTTTGC TACCGAAACA GCGAGTATCA AGCTATCGGA ACTTTCACTG
GGCATAGGTC CTTTTGTGAT TGCTCCTGCA ATCTTACGTA AAGCCGGACA AGCAACACTC
AACGAACTTT TTATGGCTCC TGACCAATGG AAAAGTGCTT ATTGGGCTCA ACAGAAAGGG
TTGATTGCTC GCGTGTTCGA AAATACAAAA GATATGGACG AAGCGATAGA CCTTTTTATA
GTTACGCTTC TGAAATCCAA CCCAGTAGCT TTGTCAGAAA TGAAACGCAT CACTTGGCAA
CACACTGAGC ATTGGGAACA AGAACTCATA AATAACGCAG CTATTTCAGG AAAATTAGTA
CTTTCAGAGC AAACAAGATT AATGTTAGAA AAATTGAAGA ATAAATGA
 
Protein sequence
MTDRLQGSLY TKIDKKLAVT TFGHPNANSF PLELLNRLTK EIDALSENEE VSIILLKSEG 
DRAFCAGASF DELLAVSNEE EGKRFFEGFA HLFLAMRRCK KLIIGRAQGK AVGGGVGLLA
TLDYVFATET ASIKLSELSL GIGPFVIAPA ILRKAGQATL NELFMAPDQW KSAYWAQQKG
LIARVFENTK DMDEAIDLFI VTLLKSNPVA LSEMKRITWQ HTEHWEQELI NNAAISGKLV
LSEQTRLMLE KLKNK