Gene Coch_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0031 
Symbol 
ID8366431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp35011 
End bp36021 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content43% 
IMG OID644982449 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_003140158 
Protein GI256818879 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0645987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAA TAACCGCTGC CATTACGGCT ATCGGAGGCT ATGTACCTGA AGATGTTCTA 
ACCAATGAAA TGTTAGAAAA AATGGTAGAT ACTAACGATG AGTGGATTTA CACCCGTACA 
GGTATCAAAG AAAGACGCAT ACTTAAAGAC CCTAATAAAG GTTCATCATT TTTAGGAATT 
GAAGCCGCTA AAGACCTTAT TCGCAAAACA GGTCTTGACC CCAAAGAAAT AGACTTAGTT 
ATTTTGGCTA CGGCTACCCC TGATATGCCT GTAGCCCTTA CAGGTCCTTA TGTGGCGTCG 
CAAATAGGTG CTGTGAATGC TTTTTCATTC GATTTGCAAG CTGCGTGTTC GAGCTTCCTA 
TTTGGGGTTT CGGTAGCTGC TAAATACATA GAATCAGGGC GTTATAAAAA AGTGCTCTTG 
GTGGGGGCAG ACAAAATGTC GTCTATCATA GACTATACCG ATAGAGCTAC TTGCATTATC 
TTCGGCGATG GGGGAGGGGC TGCACTCTTT GAACCCAACT ATGAAGGTTT AGGTGTGCAG 
GACGAACTCT TAAGAAGTGA TGGAATAGGA CGTAACTATT TGTACATCAA AGCAGGAGGT 
TCTCTCTGTC CGACTACGGC TGAAACAGTG GCTAACAAAG ACCATTTTGT ATTCCAAGAC 
GGTAAAACGG TGTTTAAATA CGCGGTTACA GGAATGGCTG ACATAGCAGA GGAGCTTATC 
AAACGCAACG GTTTGACCTC AAACGAAGTG CAATGGCTTA CGCCTCACCA AGCTAATAAA 
CGCATTATTG ATGCTACTGC CGAGCGTATG GGATTACCTG CTGAAAAAGT GATGCTCAAC 
ATTCACAAGT ACGGCAATAC AACTTCGGCA ACCATCATCT TAGCTCTTAA CGACTACGAA 
AACCAACTCA AAAAAGGAGA CAATATAGTA TTGGTAGCCT TTGGGGGAGG TTTCACTTGG 
GGAGCTATTT ACTTAAAATG GGCATACGAC GGAGCCCTTT ATCACAAATA A
 
Protein sequence
MEKITAAITA IGGYVPEDVL TNEMLEKMVD TNDEWIYTRT GIKERRILKD PNKGSSFLGI 
EAAKDLIRKT GLDPKEIDLV ILATATPDMP VALTGPYVAS QIGAVNAFSF DLQAACSSFL 
FGVSVAAKYI ESGRYKKVLL VGADKMSSII DYTDRATCII FGDGGGAALF EPNYEGLGVQ 
DELLRSDGIG RNYLYIKAGG SLCPTTAETV ANKDHFVFQD GKTVFKYAVT GMADIAEELI 
KRNGLTSNEV QWLTPHQANK RIIDATAERM GLPAEKVMLN IHKYGNTTSA TIILALNDYE 
NQLKKGDNIV LVAFGGGFTW GAIYLKWAYD GALYHK