Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0029 |
Symbol | |
ID | 8366429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 33111 |
End bp | 34463 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644982447 |
Product | acetyl-CoA carboxylase, biotin carboxylase |
Protein accession | YP_003140156 |
Protein GI | 256818877 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00270537 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAA AAATATTGAT AGCCAACCGT GGAGAAATTG CCTTACGCGT GATACGTACG TGTCGCGAAA TGGGTATCAA ATCGGTAGCC GTATACTCTA CTGCCGATGC TGACAGCTTG CACGTGCGTT TTGCGGATGA AGCTGTGTGT ATAGGTCCTC CACCCAGCAA AGATTCATAC TTAAAAATAC CTAATATTAT AGCCGCTGCC GAAATTACCA ATGCCGATGC CATACACCCA GGCTACGGAT TTCTTTCGGA AAATGCGAAA TTCTCGAAGA TTTGTGCAGA ACACGGCATT AAGTTTATAG GCGCATCGCC TGAAATGATT GAAAAAATGG GTGATAAGGC ATCAGCTAAA GCGACTATGA AAGCCGCAGG AGTGCCTACC GTACCAGGTT CTGACGGGCT CGTAGAATCG TTGGAGCACG CTAAAAAGAT AGCTGCTGAA ATAGGCTACC CTGTGATGCT GAAAGCTACT GCCGGTGGGG GAGGTCGCGG TATGCGCGAT GTATGGAAAG AGGAAGACCT CGAGAAAGCC CTCAACAGTG CGATGCAGGA AGCAGGAGCT GCCTTTGGTA ACGATGCGAT GTATATGGAA AAGCTGATTG TAGACCCTCG TCACATTGAG ATACAAATCG TAGGCGACCA ATACGGCAAG GCTTGTCACC TTTCAGAACG CGATTGCTCG ATACAGCGTC GCCACCAGAA ACTTACCGAA GAAACGCCGT CGCCTTTTAT GACGGACGAC CTTCGCAAGC GTATGGGAGA AGCTGCAGTG AAAGCTGCTG AGTATATCAA ATATGAAGGG GCAGGAACGG TAGAGTTCTT GGTAGACAAA GATCGCAATT TCTACTTTAT GGAGATGAAT ACTCGTATAC AAGTAGAGCA CCCTATCACT GAACAGGTGA TAGACTACGA CCTTATTCGC GAGCAGATAT TGGTAGCTGC CGGAGTGCCT ATCTCAGGTA AGAACTACAC GCCTAAACTG CACGCCATAG AGTGTCGTAT CAATGCGGAA GACCCTTATA ACGACTTCCG TCCGTCGCCA GGTAAGATTA CCACCTTGCA CGCCCCAGGA GGTCACGGAG TACGCCTCGA TACTCACGTG TACAGTGGTT ATGTAATTCC GCCTAACTAC GACTCGATGA TTGCAAAACT CATCACTACA GCGCAAACCC GTGAGGAAGC AATTGCCAAG ATGAAACGCG CCTTAGACGA GTTTGTAGTA GAAGGAGTGA AAACTACGAT TCCGTTCCAC TTGCAACTAA TGGACGACCC CGATTACTTA GCAGGCAATT ACACTACTAA GTTTATGGAG GATTTCCAGA TGAAACCCCA AGTGGCAGAA TAA
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Protein sequence | MFKKILIANR GEIALRVIRT CREMGIKSVA VYSTADADSL HVRFADEAVC IGPPPSKDSY LKIPNIIAAA EITNADAIHP GYGFLSENAK FSKICAEHGI KFIGASPEMI EKMGDKASAK ATMKAAGVPT VPGSDGLVES LEHAKKIAAE IGYPVMLKAT AGGGGRGMRD VWKEEDLEKA LNSAMQEAGA AFGNDAMYME KLIVDPRHIE IQIVGDQYGK ACHLSERDCS IQRRHQKLTE ETPSPFMTDD LRKRMGEAAV KAAEYIKYEG AGTVEFLVDK DRNFYFMEMN TRIQVEHPIT EQVIDYDLIR EQILVAAGVP ISGKNYTPKL HAIECRINAE DPYNDFRPSP GKITTLHAPG GHGVRLDTHV YSGYVIPPNY DSMIAKLITT AQTREEAIAK MKRALDEFVV EGVKTTIPFH LQLMDDPDYL AGNYTTKFME DFQMKPQVAE
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