| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0027 |
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| Symbol | |
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| ID | 8366427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 31848 |
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| End bp | 32585 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644982445 |
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| Product | 3-deoxy-D-manno- octulosonatecytidylyltransferase |
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| Protein accession | YP_003140154 |
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| Protein GI | 256818875 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.211748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACTGA TAGCAATGAT ACCTGCCCGC TACGGAGCGA CCCGCTTTCC TGCAAAGCTG
ATGCAAGACC TTTGTGGCAA GCCTGTAATT GTACATACTT ATGAACGTGT AGCTGATACC
CGCTTGTTTG ACGAAGTGTA TGTGGTAACT GATGATGACC GTATAGAAAA AGTGATACGG
GAGGTAGGAG GCAAAGTAAT TCGCAGTAAA AAAGAACACA ATAGTGGCAG TGACCGTTTG
GCAGAAGCTT CAAGAGATTT AGACGTAGAT ATTATTGTGA ATGTACAAGG AGATGAGCCT
TTTACAGATA AAGAGAACTT ACAAAAAGTA ATTGATATTT TTGCTAAAGA CCTTACTAAA
AGCATAGCGG TAGCAAGCCT AATGGAGCGT ATTATCGACC CAGATGATAT TGCAAACCCA
AACAATGTGA AGGTAGTAGT GAACAAATTT GGAGAGGCAC TCTATTTTTC GAGGAATATC
ATTCCCTTTC CTCGCGACCC TAACACCAAG GTGTCTTATT ACAAGCACAT AGGTATTTAC
GCCTATCGCA AAGAAGCATT ACAACAGTTC ACCGAGTTAC CTCCTTCCTT ATTAGAAGAA
ACGGAAAAAT TAGAACAGCT TCGTTACTTA GAAAATGGGT TTAAAATACG TTTAGCGCTA
ACCGATATTC CTACTATAGG GATTGATACC CCCGAAGATT TGGAGAGGGC ACGTAAGCGA
TTGATTACAC AAAAGTGA
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| Protein sequence | MKLIAMIPAR YGATRFPAKL MQDLCGKPVI VHTYERVADT RLFDEVYVVT DDDRIEKVIR
EVGGKVIRSK KEHNSGSDRL AEASRDLDVD IIVNVQGDEP FTDKENLQKV IDIFAKDLTK
SIAVASLMER IIDPDDIANP NNVKVVVNKF GEALYFSRNI IPFPRDPNTK VSYYKHIGIY
AYRKEALQQF TELPPSLLEE TEKLEQLRYL ENGFKIRLAL TDIPTIGIDT PEDLERARKR
LITQK
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