Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0020 |
Symbol | |
ID | 8366420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 23003 |
End bp | 25855 |
Gene Length | 2853 bp |
Protein Length | 950 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644982438 |
Product | Non-specific serine/threonine protein kinase |
Protein accession | YP_003140147 |
Protein GI | 256818868 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTTAT TTTTTGATTT TAGCTTTCAC CCTACCATAG AACTATCTTT GCCTAATGCT TATTTAGCCG AAAAACAAAA CGGATACGCC TCGTTTTACA AGAAAGCTAC CACAGAAGTA TTACATAGTT TGACTAACTT TGAACCATCA GAAAGTGAAA AAGAGGCTTT AAGTATCGTA AATAGTCTAC AACCTAATAT TCTACATCAA AAATACATCA AAAAAGGGGA TAGTTTTGAA GAAATATACA AAAATACCCA AATAAAAAAG CACATTCAAC AACAAATAGA AGAAAAAACA GCTGAATTAC TTTCTATTAT TGCAGAAAAT AGTTTGTTTA TCACTACTAA CTACAATCAC AAAGACGATA TCAGTAAGAA AATACTACCC ATAAGCACGA ATATAATTGA ACCTTTATTG GAATTTACAA AAATTGAAGG AGGTATTAGT TATCGGTTGT TGTTACAGGA AGACGATGAA AAATTATTGC CTTGTGAAAG CCATATCGAA CTGCTGAACA ACTCATACGC TTGGATTGTA CTCAAAGGGC AAGTAGTGCG AGTAGCACAT ATTAAAGCTT CGCACCTTAA ACCTTTTTTG AATAAAGAAA GTACCTTTAT TCCCGAAAAA ACTTTTCCCG AATACTTCGA GAAATTCCTT AAAAAGGTAC TTAGAAATGC ACAGGTAGAA GCAAAAGGCT TTAAAATTAT TACTCAGAAT GAATTAAAAA GTAGTGAATT GGATATTTTA TACGATTTCT TTGCCAATCA TTACAAAATA TACATACACT TTGATTACAA TGGTTATACT TTTGACAGTA ATCAAGCGAA AAACAATCAG TCGAACTTAG AAATAAGCCC CAATAACGAT ATAAAAATAT ATAATTACCA ACGAAATAAA AAAGAAGAAA CAAGAAAGTA TCGCCTTTTG GAACAGTTAG GTTTTGTGAA CGACGGAGGT ACTTTTTCAG TTGAAAGTAA AGACCCTTTT GCTTCGTATT TTCATCTGTT GCACTGCAAA AAAGATTTGG AAGAAGCAGG TTTTGGCTTT CATACTTTCA GCATAGAAGG TGGAAAAGAG ATAAGTGAAC ATCTGCCTGA GCTCATTTTT GCAGAAACAA GTACCGAAAA CGATTGGTTT GACCTCAATA TAAGAGTAAA ACAAGGAGAA AATAGCTTTC ATTTTAAAGA TTTAATCAAG AATTTAAAAG AAAATAACCC TATTTACTTA CTTCCTGATG GGAAAGCCTT CATTATTCCT CAAGAATGGT TTAGTAAGTT TGGTAGTATT GCCAAATATG CACAAATTAG GCAGGAGAAA CTGCAAATTA GCAAGAGTAA CTATGCACTT TTGGAAGCTG TACCCGAGAT AAAACCTCAG AACTTAGTAG AAAAAGTGAG TTATACCCCC TCGCCTAACC TACGAGCTAC CTTACGTCCG TATCAAATAG AGGGTGTGGA GTGGCTTTTA CAACACTATT ACAATGGTGT TGGGGCGTGC CTTGCTGATG ATATGGGACT GGGGAAAACA CTACAAACCA TTGCCTTATT GGTGGCTATA CACGATGCTT TACCCGAAAA AACGATTGAA ACTGCCGACC TTTTTTCAGG AATAGAAAAG AGTAAAGAGG CTCTAAAAGT ATTGGTTATT CTGCCTTCAT CGCTCATTTT TAATTGGTAT GACGAGACTA AAAGGTTTGC TCCACATTTT AAATGCACAC AATACGTGGG GGCTGACCGA AAAGTAAAAG CCAAACGCTT AGGCAATTAC GATATGGTTT TTACCAGTTA TCCGATAGTA GAACGCGACG TGGAACTGTT CCAAAAGTAC GAATTTAGGT ATATCATTTT AGATGAAAGC CAGCGTATTA AAAACAAGAA CTCAAAGACA TTCAAAGCAA TACATACCTT AAAAGCGACT CATCGCATTG CGCTGAGTGG GACACCTATT GAGAATTCAC TCAGTGACTT ATGGTCGCAG ATGCAATTTA TCAATCCGAA TATACTGAAA AGTTATACTT CGTTTTACAA GAACTATGAA GTGGAAATCA GCAAAAAGAA AAACACACAA GCCTTAGAGG AGTTAAAGAC CATTATCAGT CCGTTTTTAC TAAGGCGGAC AAAGGAGCAA GTGCTTGACG ATTTGCCAGA AATGGAAGAG CAAATTATCT ACTGTCCTAT GAGTGAAGCC CAGCACAAAT GGTATGAAAC AGAAAAATCG AAAGTGCGTA ACCAACTTTT ACAAATTAAT GAGCCAATCA CTGAATTTAA CACCCTAAAT ATGCTAATGA GGCTTAGAAA AATAAGCTTA CACCCTAAAT TAGTAGACAA AGAGAGTAAA ATTGCATCAG GAAAGTACGA AGAAGTGATA AATTATATGG AGGAATTGCT ACAATCATCT CGAAAAGCAC TTATTTTTAG CAGTTTTGTG AGTCATTTAG CACTTTATGA AGAATGGTGT AACAAAAAAG GGATAAAATA TGCCAAACTA ACAGGCGAAA CACCTTCGTT TGAGCGCAAG AACCAAGTAG AGATGTTTCA GAACAATCCC AGTATATCGT TCTTTTTCAT TTCGCTTAAA GCAGGTGAGG TAGGGTTAAA TCTCACGCAG GCATCTTATG TTTTGTTATT AGACCCGTGG TGGAATCCGT TTTCTGAAAA GCAAGCTATT GGGAGGGCTC ACCGTATAGA GCAACAAAAT AAAGTGAACG TAATACGCTT TGTGAGCAAG GATACCATTG AGGAAAAAAT CATCAAATTA CAGAAAAGTA AAACAGAACT TTCCGAAAAC ATTATCGATG AAAATCACAT CATTAAGGAA GTAATGGAAC AAATTAATAG CTTATTGGAA TAA
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Protein sequence | MFLFFDFSFH PTIELSLPNA YLAEKQNGYA SFYKKATTEV LHSLTNFEPS ESEKEALSIV NSLQPNILHQ KYIKKGDSFE EIYKNTQIKK HIQQQIEEKT AELLSIIAEN SLFITTNYNH KDDISKKILP ISTNIIEPLL EFTKIEGGIS YRLLLQEDDE KLLPCESHIE LLNNSYAWIV LKGQVVRVAH IKASHLKPFL NKESTFIPEK TFPEYFEKFL KKVLRNAQVE AKGFKIITQN ELKSSELDIL YDFFANHYKI YIHFDYNGYT FDSNQAKNNQ SNLEISPNND IKIYNYQRNK KEETRKYRLL EQLGFVNDGG TFSVESKDPF ASYFHLLHCK KDLEEAGFGF HTFSIEGGKE ISEHLPELIF AETSTENDWF DLNIRVKQGE NSFHFKDLIK NLKENNPIYL LPDGKAFIIP QEWFSKFGSI AKYAQIRQEK LQISKSNYAL LEAVPEIKPQ NLVEKVSYTP SPNLRATLRP YQIEGVEWLL QHYYNGVGAC LADDMGLGKT LQTIALLVAI HDALPEKTIE TADLFSGIEK SKEALKVLVI LPSSLIFNWY DETKRFAPHF KCTQYVGADR KVKAKRLGNY DMVFTSYPIV ERDVELFQKY EFRYIILDES QRIKNKNSKT FKAIHTLKAT HRIALSGTPI ENSLSDLWSQ MQFINPNILK SYTSFYKNYE VEISKKKNTQ ALEELKTIIS PFLLRRTKEQ VLDDLPEMEE QIIYCPMSEA QHKWYETEKS KVRNQLLQIN EPITEFNTLN MLMRLRKISL HPKLVDKESK IASGKYEEVI NYMEELLQSS RKALIFSSFV SHLALYEEWC NKKGIKYAKL TGETPSFERK NQVEMFQNNP SISFFFISLK AGEVGLNLTQ ASYVLLLDPW WNPFSEKQAI GRAHRIEQQN KVNVIRFVSK DTIEEKIIKL QKSKTELSEN IIDENHIIKE VMEQINSLLE
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